| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871818
Identifier: 116871818
GI number: 116871818
Start: 416227
End: 416781
Strand: Direct
Name: 116871818
Synonym: lwe0398
Alternate gene names: NA
Gene position: 416227-416781 (Clockwise)
Preceding gene: 116871817
Following gene: 116871819
Centisome position: 14.79
GC content: 39.64
Gene sequence:
>555_bases ATGTCCCCAAAATTCATGTACGAAAGATTACTAAAATGCCAAGAAGCAAATAAACTAGTAGCCATCTACGCGTCACGCGA AGACGAATATTTCGAGGCGGGCTACATTGAAGCAGTTACAGCGAGTGATGTTATGTTCCGCTCGCGACGTTCGGACGGTT ACGAAGAGGGACATGTTGTTCTCCCGTTAGAATTAGTGTATCGAATAGAAATTGACACGGCGCATTTAAAAACAGCCGAA CTACTCGCAAAACATCTTAATCAACCAATCAGCGCAGGATTATTTGAGAAAGCACCAAACAAAAAGCATTCTCTTTTCGA AATTGCCGCTGATTATGTATACCAAAGTAAAGAGATAATCTTTATTGACATTATTGGAGACGAGACGCCAGCAATTGGAA TGATCGCTGAAAACGAATATGAAGGATTAGAAATTACTTTAGTGGATGACGAAGGTCGATTAGATGGAACTTGTTGGATA AAAAAAGAAGATATTCTAGCCCTGCGTTTCGGCGGCAGTGTAGAACAAGATTTGATGAACAAACTAAAAAAATAA
Upstream 100 bases:
>100_bases CGTTTTCGATGTGACAGCAGTAGCATTATTTGGTAAGGGGAGTGAAGCAGTAACTTTTTTAGAATCATTCCACTAAACAT AAGTTGGTGTGTTACAGAAA
Downstream 100 bases:
>100_bases ACTAAGAATAAGCCCTCCACTTTTATAGGAGGGCTTATTATAAAAGTAAGAGAAGTAAATAACCAAATTAGGAGATTGAA ATGGATTCAATTTTGAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSPKFMYERLLKCQEANKLVAIYASREDEYFEAGYIEAVTASDVMFRSRRSDGYEEGHVVLPLELVYRIEIDTAHLKTAE LLAKHLNQPISAGLFEKAPNKKHSLFEIAADYVYQSKEIIFIDIIGDETPAIGMIAENEYEGLEITLVDDEGRLDGTCWI KKEDILALRFGGSVEQDLMNKLKK
Sequences:
>Translated_184_residues MSPKFMYERLLKCQEANKLVAIYASREDEYFEAGYIEAVTASDVMFRSRRSDGYEEGHVVLPLELVYRIEIDTAHLKTAE LLAKHLNQPISAGLFEKAPNKKHSLFEIAADYVYQSKEIIFIDIIGDETPAIGMIAENEYEGLEITLVDDEGRLDGTCWI KKEDILALRFGGSVEQDLMNKLKK >Mature_183_residues SPKFMYERLLKCQEANKLVAIYASREDEYFEAGYIEAVTASDVMFRSRRSDGYEEGHVVLPLELVYRIEIDTAHLKTAEL LAKHLNQPISAGLFEKAPNKKHSLFEIAADYVYQSKEIIFIDIIGDETPAIGMIAENEYEGLEITLVDDEGRLDGTCWIK KEDILALRFGGSVEQDLMNKLKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20956; Mature: 20825
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPKFMYERLLKCQEANKLVAIYASREDEYFEAGYIEAVTASDVMFRSRRSDGYEEGHVV CCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCEEE LPLELVYRIEIDTAHLKTAELLAKHLNQPISAGLFEKAPNKKHSLFEIAADYVYQSKEII EEEEEEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCEE FIDIIGDETPAIGMIAENEYEGLEITLVDDEGRLDGTCWIKKEDILALRFGGSVEQDLMN EEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEECCCCHHHHHH KLKK HHCC >Mature Secondary Structure SPKFMYERLLKCQEANKLVAIYASREDEYFEAGYIEAVTASDVMFRSRRSDGYEEGHVV CCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCEEE LPLELVYRIEIDTAHLKTAELLAKHLNQPISAGLFEKAPNKKHSLFEIAADYVYQSKEII EEEEEEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCEE FIDIIGDETPAIGMIAENEYEGLEITLVDDEGRLDGTCWIKKEDILALRFGGSVEQDLMN EEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEECCCCHHHHHH KLKK HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA