| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871819
Identifier: 116871819
GI number: 116871819
Start: 417277
End: 417711
Strand: Direct
Name: 116871819
Synonym: lwe0399
Alternate gene names: NA
Gene position: 417277-417711 (Clockwise)
Preceding gene: 116871818
Following gene: 116871820
Centisome position: 14.83
GC content: 31.03
Gene sequence:
>435_bases ATGATATACAGTGTAGGTATGACTACTATGGAGTCATATGATGAAAAAGAACAAGAGTATTTTAGTATTATGTCTGAAAT AAGAACGGTGGTAAATCCACTATTTGATAAATATGATATATATGAATATACAGTAGATAGAAAGAAGCGAAGTGATCTAG CATTCCCATTAAAGCCTAAGCGTTTTCTAAACATTTTTAAGTCAGAGCCGCTGAGGGAAAACCCTGGAATAATGGAATAT AACAAATTTATAATTGTAACTAAAGGAGTAGATATAAAGGCATTACTTAGCGGAGTGTCAGACCTTAATAGACGCGAAAA CATTGAATATTTTTTAGTGCAAAATACAATCATGACTTACCAGATTCTAGAAGGCGAAGTAATAAATTTCTATGCAAAAG ACTTGAAATTTTTAGTTGAAGAATTAGCTTTATAG
Upstream 100 bases:
>100_bases GTTTATTGTATAATGCTAGTCCCTCGGTTGGGTATTTAAGGAATAAAAATTTTAGAAAGTCTATTACAAAATGCAGTGAA CAAACGTGAGGAGGAACAAC
Downstream 100 bases:
>100_bases CGGTAGACGATGTGAGGCAAATAATTGCCAAATTAATTTAAGTCAAAGTCATTTATATATAAAATTTCAGAGTTAGAAGA CCTACTGAGGCTTATCCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MIYSVGMTTMESYDEKEQEYFSIMSEIRTVVNPLFDKYDIYEYTVDRKKRSDLAFPLKPKRFLNIFKSEPLRENPGIMEY NKFIIVTKGVDIKALLSGVSDLNRRENIEYFLVQNTIMTYQILEGEVINFYAKDLKFLVEELAL
Sequences:
>Translated_144_residues MIYSVGMTTMESYDEKEQEYFSIMSEIRTVVNPLFDKYDIYEYTVDRKKRSDLAFPLKPKRFLNIFKSEPLRENPGIMEY NKFIIVTKGVDIKALLSGVSDLNRRENIEYFLVQNTIMTYQILEGEVINFYAKDLKFLVEELAL >Mature_144_residues MIYSVGMTTMESYDEKEQEYFSIMSEIRTVVNPLFDKYDIYEYTVDRKKRSDLAFPLKPKRFLNIFKSEPLRENPGIMEY NKFIIVTKGVDIKALLSGVSDLNRRENIEYFLVQNTIMTYQILEGEVINFYAKDLKFLVEELAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17054; Mature: 17054
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYSVGMTTMESYDEKEQEYFSIMSEIRTVVNPLFDKYDIYEYTVDRKKRSDLAFPLKPK CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHH RFLNIFKSEPLRENPGIMEYNKFIIVTKGVDIKALLSGVSDLNRRENIEYFLVQNTIMTY HHHHHHHCCCCCCCCCCEEECCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECHHHEE QILEGEVINFYAKDLKFLVEELAL HHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIYSVGMTTMESYDEKEQEYFSIMSEIRTVVNPLFDKYDIYEYTVDRKKRSDLAFPLKPK CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHH RFLNIFKSEPLRENPGIMEYNKFIIVTKGVDIKALLSGVSDLNRRENIEYFLVQNTIMTY HHHHHHHCCCCCCCCCCEEECCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECHHHEE QILEGEVINFYAKDLKFLVEELAL HHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA