| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871712
Identifier: 116871712
GI number: 116871712
Start: 316194
End: 318119
Strand: Direct
Name: 116871712
Synonym: lwe0292
Alternate gene names: NA
Gene position: 316194-318119 (Clockwise)
Preceding gene: 116871711
Following gene: 116871714
Centisome position: 11.24
GC content: 29.44
Gene sequence:
>1926_bases ATGAGTGAAAAAGAATACAATCTGGATATTGATCCAAGAATATTAGAATTATTAGGCCCCCATTTGTATACGAATATCTA TTACATTTTAGGGGAATTAATAGCTAATGCTTATGATGCAGATGCTAAAAATGTATATGTAATAGATAGAATAGATGAAG AAAACAAACTTATTGTTGAAGATGATGGTAGCGGAATGTCTTATGAGAATAAGGATGTTAAAAATTTTTTGAGTGTCGCT AAAGAAAGTAGAACGAACGTAGTAAATTCATATACAAAAGTAAATAATCGTCGAAAAATGGGGAGAAAGGGTGTGGGGAA ACTTGCCTCCCTATCAGTCTCGGAGAATGTGAATATTAAGACAATAAAAGATGGTGAAAAATCTGGATTTGTATTATCAA GAAAGGTTATCAATAAAAAATTAGAAGCAATTAATGAAGATACCATTAACTTTATTAAAATTAAAAATCATGGAACCGCA ATTGAGATGACAAATCCTACATATAAATTACCTGTTCATTTAAGTACAATGGCGAACAATCTCTTGAAAATATTTCCGCT TGTAGATGAAACATTTAGAATTCATCTTATTAGAGGAGATAAACATGAAATTTTGGAAGAATCACAGAGCGCTTTAGTCA GGAAAATGGCTGTTTTAACTACTTTAGGTGAAGATTATAAGAAGATGAATGAATTCTATAATTGCGATTTCAAGGAACAG AAAAATAGTTTATTGAAAAATAAAGAATCTAAAAAAATTATACTTAATATGCTCAATAAAGATAACGAGGAACAAGATTA TACTTTAGAAATTAAGGGATGGGTAGGGGCATACAAAACCACCAGAGAAATGAAAAAAAACATGCAAGAATTTTCTGATA ATTTCATTTCACTTTATGCTAATTCAAAACTTGGGATATTTAATATTTTACCAATTGTAGGGAAAAATAAATTACAAGAG GTATATATCGCTGGTCAACTTCATATTGATCTATTTGAGGAAACTAATCTTCCAGATATGGCTTTAAGTAATAGACAAGG GTATAAAAGTGATGATGAGAGATATCGAAAAGTTTTAGAATACGTTAAAAATGAACTTTTACCTAACATTTTGACAGATA GATCTTTTTATTCTGACCTTTTGAAAGCTGGAAAGAAAGAGAAAGAAATAAAGCGACAAAAGAAGAAAGAAGAAGAATTA AAAGAAAAAAGTCTGGATTTCAAACGTGAAGTAACACAAGAAATGACTAGTGAACTTTCTAAAATAAGTCCAATAAATAA GAATAAAGTCGAAAATATTGTAAATACTCAGGTAAATAAGCATATGAATTCTTTAGGATTAAAATCAACAATTGATTTTA ATAAAAGAAAGGTCTTGATTAGCCATACAAAAGCTGATAAAGAATTAGCAGATCTTATATATAAAACGCTTCTTAGCAAT GGATTTTCAAAAGATTCTATTCTATACAGTAACTGTGAAGATGAAGAAGCGAGAATTCCGGCTAAGATGAGTATATATGG TTATCTGAGAGATTTTTTTGTGGATAGTATTTCTATGGAAAAAATATATGTTATTTATGTTACTAGTAAAAATATGAGGA CCTCGTGGGGCGCGATAGCTGAGGTAGGCGCAGGGTGGATTACACAAACAGACCATTGTATATTTACTCTTAATGATTTT TCACCAGAAGCACCTTTGGATGTAAGGCGACAATATCAGAATACAATGAGATTTGAAGATGAATTTTATATGGATAATAT TGAGTTTGATAAGTTTTGTAGTTTTATAGAAGATATTGGAAAGAAATTTGGATGTAATATTCTCAGTAGAGACAAGAATA AAGAAGCATTAAAAGATGATGTTCACGTTGTTTCAAGTGATGAATTATTTAAGCTAAAACAAAAATATTCATCAAACTCT AATTAA
Upstream 100 bases:
>100_bases TAGGAAATGCTGTACCTGTTAAATTGGGAGAGGTTATCGGGGAAAGTATAAAAACACATCTAGAAAATAATAAATTATTA TCATAAGGAGAGTGCTAGAG
Downstream 100 bases:
>100_bases CTAAAGTATTGTATAGTTTTGCCGAAAATCAATTAGAACCATTAGCAAAATGAAACTAAATTAATCAAAAACCCAGGTTA CCCTCTCTAAAAGGGCAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF68 [H]
Number of amino acids: Translated: 641; Mature: 640
Protein sequence:
>641_residues MSEKEYNLDIDPRILELLGPHLYTNIYYILGELIANAYDADAKNVYVIDRIDEENKLIVEDDGSGMSYENKDVKNFLSVA KESRTNVVNSYTKVNNRRKMGRKGVGKLASLSVSENVNIKTIKDGEKSGFVLSRKVINKKLEAINEDTINFIKIKNHGTA IEMTNPTYKLPVHLSTMANNLLKIFPLVDETFRIHLIRGDKHEILEESQSALVRKMAVLTTLGEDYKKMNEFYNCDFKEQ KNSLLKNKESKKIILNMLNKDNEEQDYTLEIKGWVGAYKTTREMKKNMQEFSDNFISLYANSKLGIFNILPIVGKNKLQE VYIAGQLHIDLFEETNLPDMALSNRQGYKSDDERYRKVLEYVKNELLPNILTDRSFYSDLLKAGKKEKEIKRQKKKEEEL KEKSLDFKREVTQEMTSELSKISPINKNKVENIVNTQVNKHMNSLGLKSTIDFNKRKVLISHTKADKELADLIYKTLLSN GFSKDSILYSNCEDEEARIPAKMSIYGYLRDFFVDSISMEKIYVIYVTSKNMRTSWGAIAEVGAGWITQTDHCIFTLNDF SPEAPLDVRRQYQNTMRFEDEFYMDNIEFDKFCSFIEDIGKKFGCNILSRDKNKEALKDDVHVVSSDELFKLKQKYSSNS N
Sequences:
>Translated_641_residues MSEKEYNLDIDPRILELLGPHLYTNIYYILGELIANAYDADAKNVYVIDRIDEENKLIVEDDGSGMSYENKDVKNFLSVA KESRTNVVNSYTKVNNRRKMGRKGVGKLASLSVSENVNIKTIKDGEKSGFVLSRKVINKKLEAINEDTINFIKIKNHGTA IEMTNPTYKLPVHLSTMANNLLKIFPLVDETFRIHLIRGDKHEILEESQSALVRKMAVLTTLGEDYKKMNEFYNCDFKEQ KNSLLKNKESKKIILNMLNKDNEEQDYTLEIKGWVGAYKTTREMKKNMQEFSDNFISLYANSKLGIFNILPIVGKNKLQE VYIAGQLHIDLFEETNLPDMALSNRQGYKSDDERYRKVLEYVKNELLPNILTDRSFYSDLLKAGKKEKEIKRQKKKEEEL KEKSLDFKREVTQEMTSELSKISPINKNKVENIVNTQVNKHMNSLGLKSTIDFNKRKVLISHTKADKELADLIYKTLLSN GFSKDSILYSNCEDEEARIPAKMSIYGYLRDFFVDSISMEKIYVIYVTSKNMRTSWGAIAEVGAGWITQTDHCIFTLNDF SPEAPLDVRRQYQNTMRFEDEFYMDNIEFDKFCSFIEDIGKKFGCNILSRDKNKEALKDDVHVVSSDELFKLKQKYSSNS N >Mature_640_residues SEKEYNLDIDPRILELLGPHLYTNIYYILGELIANAYDADAKNVYVIDRIDEENKLIVEDDGSGMSYENKDVKNFLSVAK ESRTNVVNSYTKVNNRRKMGRKGVGKLASLSVSENVNIKTIKDGEKSGFVLSRKVINKKLEAINEDTINFIKIKNHGTAI EMTNPTYKLPVHLSTMANNLLKIFPLVDETFRIHLIRGDKHEILEESQSALVRKMAVLTTLGEDYKKMNEFYNCDFKEQK NSLLKNKESKKIILNMLNKDNEEQDYTLEIKGWVGAYKTTREMKKNMQEFSDNFISLYANSKLGIFNILPIVGKNKLQEV YIAGQLHIDLFEETNLPDMALSNRQGYKSDDERYRKVLEYVKNELLPNILTDRSFYSDLLKAGKKEKEIKRQKKKEEELK EKSLDFKREVTQEMTSELSKISPINKNKVENIVNTQVNKHMNSLGLKSTIDFNKRKVLISHTKADKELADLIYKTLLSNG FSKDSILYSNCEDEEARIPAKMSIYGYLRDFFVDSISMEKIYVIYVTSKNMRTSWGAIAEVGAGWITQTDHCIFTLNDFS PEAPLDVRRQYQNTMRFEDEFYMDNIEFDKFCSFIEDIGKKFGCNILSRDKNKEALKDDVHVVSSDELFKLKQKYSSNSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 [H]
Pfam domain/function: PF02518 HATPase_c [H]
EC number: NA
Molecular weight: Translated: 74185; Mature: 74053
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKEYNLDIDPRILELLGPHLYTNIYYILGELIANAYDADAKNVYVIDRIDEENKLIVE CCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEE DDGSGMSYENKDVKNFLSVAKESRTNVVNSYTKVNNRRKMGRKGVGKLASLSVSENVNIK ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHEEEECCCCCEE TIKDGEKSGFVLSRKVINKKLEAINEDTINFIKIKNHGTAIEMTNPTYKLPVHLSTMANN EECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCEEEEEEHHHHHHH LLKIFPLVDETFRIHLIRGDKHEILEESQSALVRKMAVLTTLGEDYKKMNEFYNCDFKEQ HHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH KNSLLKNKESKKIILNMLNKDNEEQDYTLEIKGWVGAYKTTREMKKNMQEFSDNFISLYA HHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEE NSKLGIFNILPIVGKNKLQEVYIAGQLHIDLFEETNLPDMALSNRQGYKSDDERYRKVLE CCCCCCEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHH YVKNELLPNILTDRSFYSDLLKAGKKEKEIKRQKKKEEELKEKSLDFKREVTQEMTSELS HHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KISPINKNKVENIVNTQVNKHMNSLGLKSTIDFNKRKVLISHTKADKELADLIYKTLLSN HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHC GFSKDSILYSNCEDEEARIPAKMSIYGYLRDFFVDSISMEKIYVIYVTSKNMRTSWGAIA CCCCCCEEECCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH EVGAGWITQTDHCIFTLNDFSPEAPLDVRRQYQNTMRFEDEFYMDNIEFDKFCSFIEDIG HHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHH KKFGCNILSRDKNKEALKDDVHVVSSDELFKLKQKYSSNSN HHHCCCHHCCCCCHHHHHHHHEEECCHHHHHHHHHHCCCCC >Mature Secondary Structure SEKEYNLDIDPRILELLGPHLYTNIYYILGELIANAYDADAKNVYVIDRIDEENKLIVE CCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEE DDGSGMSYENKDVKNFLSVAKESRTNVVNSYTKVNNRRKMGRKGVGKLASLSVSENVNIK ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHEEEECCCCCEE TIKDGEKSGFVLSRKVINKKLEAINEDTINFIKIKNHGTAIEMTNPTYKLPVHLSTMANN EECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCEEEEEEHHHHHHH LLKIFPLVDETFRIHLIRGDKHEILEESQSALVRKMAVLTTLGEDYKKMNEFYNCDFKEQ HHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH KNSLLKNKESKKIILNMLNKDNEEQDYTLEIKGWVGAYKTTREMKKNMQEFSDNFISLYA HHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEE NSKLGIFNILPIVGKNKLQEVYIAGQLHIDLFEETNLPDMALSNRQGYKSDDERYRKVLE CCCCCCEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHH YVKNELLPNILTDRSFYSDLLKAGKKEKEIKRQKKKEEELKEKSLDFKREVTQEMTSELS HHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KISPINKNKVENIVNTQVNKHMNSLGLKSTIDFNKRKVLISHTKADKELADLIYKTLLSN HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHC GFSKDSILYSNCEDEEARIPAKMSIYGYLRDFFVDSISMEKIYVIYVTSKNMRTSWGAIA CCCCCCEEECCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH EVGAGWITQTDHCIFTLNDFSPEAPLDVRRQYQNTMRFEDEFYMDNIEFDKFCSFIEDIG HHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHH KKFGCNILSRDKNKEALKDDVHVVSSDELFKLKQKYSSNSN HHHCCCHHCCCCCHHHHHHHHEEECCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1937045 [H]