| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871703
Identifier: 116871703
GI number: 116871703
Start: 308693
End: 309625
Strand: Direct
Name: 116871703
Synonym: lwe0283
Alternate gene names: NA
Gene position: 308693-309625 (Clockwise)
Preceding gene: 116871702
Following gene: 116871704
Centisome position: 10.97
GC content: 34.19
Gene sequence:
>933_bases ATGGCATTTAATTTAAAAGATAAACTAGTAATTGCAGTAGCATCAAGTGCATTGTTTGACTTAACAGATTCTGACAAAGT CTTTAGAGAACAACATGAGAGTGCTTACAGAATGTACCAAAGAGAGAATGAAAAAACTCCGCTTGAAAAAGGGGTAGCTT TTTCGCTTATAAAGAGGTTATTAAGTTTAAATACAGCGGACGATCATTTAATTGAAGTGATATTATTATCTAGAAATGAT CCAGATACAGGTTTAAGGGTATTTAATTCTATAGCTACATATGGGTTAGATATTTCTAGAGCAATTTTTACGGCAGGCGA AAATCCATTTAAATACATAGATCCTTTAAATGCTTCTCTTTTTTTGTCTGGTAATATTGATGATGTAAAGGAAGCGATAA GTTATAAATGTCCAGCTGGATATGTTGCTAATAAGAAATATGAGGATGACGGGGACGAAGAGTTAAGAATAGCATTTGAC TTTGATGGTGTTATTGCAGACGATGAATCTGAATCTGTATATCAGAATAATGGTGGATTGGAGAGGTATCAAGAATATGA AAAAGAACATGCAGATGATAAAATGGGAGAAGGTCCTTTGTTTGAATTTTTCAATCAGCTTGCTGAAATTCAAAAGAAAG AACTAAAGAAGGCGGACGAAGATTCATCCTATAATCCCATCATAAGAATAGCAATTTGTACTGCGAGAAATGCACCTGCA CATGAACGTGCAATTAAATCTTTACGAAGATGGGATTTGAGAGTAGATGAAGCTTTCTTTTTAGGTGGGATTGATAAGAG AACTGTTCTTGATGTATTTAAACCGCATATCTTCTTTGATGACCAAGAATGTCATATTGAATCAGTAGGAGAATCATTTC CATCTGCACATATTCCGTATGGTGTTACGAATCAGAAAAAGGATGAGGTATAG
Upstream 100 bases:
>100_bases AAGTTTGAGGCATTATCAACAAATGGTAGTGGAGAAGAAGATAAAATTCGCGCGCTTTTAAAAAGTACTCTTATACAAAA TGCAGAAGGAGAGAAATAAA
Downstream 100 bases:
>100_bases GGGTTAGATAACACAAAAAATTTGATCGTAAAAGGAGTGAATCTAAATGACAAACACGCTAAAAACCAGCTACCAAAAAA CACCTTATAAACTAGGCGGA
Product: 5'-nucleotidase, putative
Products: NA
Alternate protein names: 5-Nucleotidase 1A; 5-Nucleotidase Superfamily; 5 Nucleotidase; Uroporphyrin-III C-Methyltransferase-Like; 5-Nucleotidase Family Protein; 5-Nucleotidase Protein; 5-Nucleotidase Superfamily Protein
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MAFNLKDKLVIAVASSALFDLTDSDKVFREQHESAYRMYQRENEKTPLEKGVAFSLIKRLLSLNTADDHLIEVILLSRND PDTGLRVFNSIATYGLDISRAIFTAGENPFKYIDPLNASLFLSGNIDDVKEAISYKCPAGYVANKKYEDDGDEELRIAFD FDGVIADDESESVYQNNGGLERYQEYEKEHADDKMGEGPLFEFFNQLAEIQKKELKKADEDSSYNPIIRIAICTARNAPA HERAIKSLRRWDLRVDEAFFLGGIDKRTVLDVFKPHIFFDDQECHIESVGESFPSAHIPYGVTNQKKDEV
Sequences:
>Translated_310_residues MAFNLKDKLVIAVASSALFDLTDSDKVFREQHESAYRMYQRENEKTPLEKGVAFSLIKRLLSLNTADDHLIEVILLSRND PDTGLRVFNSIATYGLDISRAIFTAGENPFKYIDPLNASLFLSGNIDDVKEAISYKCPAGYVANKKYEDDGDEELRIAFD FDGVIADDESESVYQNNGGLERYQEYEKEHADDKMGEGPLFEFFNQLAEIQKKELKKADEDSSYNPIIRIAICTARNAPA HERAIKSLRRWDLRVDEAFFLGGIDKRTVLDVFKPHIFFDDQECHIESVGESFPSAHIPYGVTNQKKDEV >Mature_309_residues AFNLKDKLVIAVASSALFDLTDSDKVFREQHESAYRMYQRENEKTPLEKGVAFSLIKRLLSLNTADDHLIEVILLSRNDP DTGLRVFNSIATYGLDISRAIFTAGENPFKYIDPLNASLFLSGNIDDVKEAISYKCPAGYVANKKYEDDGDEELRIAFDF DGVIADDESESVYQNNGGLERYQEYEKEHADDKMGEGPLFEFFNQLAEIQKKELKKADEDSSYNPIIRIAICTARNAPAH ERAIKSLRRWDLRVDEAFFLGGIDKRTVLDVFKPHIFFDDQECHIESVGESFPSAHIPYGVTNQKKDEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI14210538, Length=312, Percent_Identity=34.9358974358974, Blast_Score=181, Evalue=8e-46, Organism=Homo sapiens, GI50593110, Length=297, Percent_Identity=34.3434343434343, Blast_Score=161, Evalue=8e-40, Organism=Homo sapiens, GI50593108, Length=291, Percent_Identity=34.7079037800687, Blast_Score=160, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35244; Mature: 35112
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFNLKDKLVIAVASSALFDLTDSDKVFREQHESAYRMYQRENEKTPLEKGVAFSLIKRL CCCCCCCCEEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LSLNTADDHLIEVILLSRNDPDTGLRVFNSIATYGLDISRAIFTAGENPFKYIDPLNASL HCCCCCCHHEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHCCCCCCEE FLSGNIDDVKEAISYKCPAGYVANKKYEDDGDEELRIAFDFDGVIADDESESVYQNNGGL EEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCHHHHCCCCH ERYQEYEKEHADDKMGEGPLFEFFNQLAEIQKKELKKADEDSSYNPIIRIAICTARNAPA HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCH HERAIKSLRRWDLRVDEAFFLGGIDKRTVLDVFKPHIFFDDQECHIESVGESFPSAHIPY HHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCCCC GVTNQKKDEV CCCCCCCCCC >Mature Secondary Structure AFNLKDKLVIAVASSALFDLTDSDKVFREQHESAYRMYQRENEKTPLEKGVAFSLIKRL CCCCCCCEEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LSLNTADDHLIEVILLSRNDPDTGLRVFNSIATYGLDISRAIFTAGENPFKYIDPLNASL HCCCCCCHHEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHCCCCCCEE FLSGNIDDVKEAISYKCPAGYVANKKYEDDGDEELRIAFDFDGVIADDESESVYQNNGGL EEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCHHHHCCCCH ERYQEYEKEHADDKMGEGPLFEFFNQLAEIQKKELKKADEDSSYNPIIRIAICTARNAPA HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCH HERAIKSLRRWDLRVDEAFFLGGIDKRTVLDVFKPHIFFDDQECHIESVGESFPSAHIPY HHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCCCC GVTNQKKDEV CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA