Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

Click here to switch to the map view.

The map label for this gene is 116871691

Identifier: 116871691

GI number: 116871691

Start: 295583

End: 296233

Strand: Direct

Name: 116871691

Synonym: lwe0271

Alternate gene names: NA

Gene position: 295583-296233 (Clockwise)

Preceding gene: 116871690

Following gene: 116871697

Centisome position: 10.5

GC content: 38.86

Gene sequence:

>651_bases
ATGAAATTTCTAAAAAAATATGGTTTTTACTTTTTAATACTGGCGGTTTTAAGTGACTTTCTAACGCCTTATATACTCGG
AATATTTTATCCTGGATTAAACCAAATGACACGGGTTATGAGTGTGTTTGGGGATGTGGCTAGTCCGGTTCGAGGGGCAT
TTTTGGTTTGGTCGGTGGTGTCGGGCGTACTGTTTGTGCTTTCGTTACCGGCGATTTATCAGAGCGCTATTAAGCAATCG
CGAACTTTGGCAATTTTGCTCGTTTCTGCGATTGGTTTGTATGGAATTGGTGATTGTATTTTCACAGGATTGTTTAGTAT
TGATACGGAGCAGTCGAGTTGGACATTTTCCACTTGGGTTCACAATATTGGCTCGGGGCTTGGTTACGCGGGATTTTTAA
TTTTTCCATTATTTTTGGTTATCTTATACAGGAAAAAAGCTGAGAAAACACTAAGTAATCTGTATCTTGTATTGTTGATT
GTCAGTTTGCTATCTGCGGGCATTTATGGACTTGCGCGGATTCCTGCTGTGAATTACTTACCAGTTTTAGATAAAATTGG
CTTTTGTCAGCGGATTAGTTTCTTTTTTAATTACTTGCCCATGGTTGTTTTTGGAGTTGACCAGATTAGAAGAGGATATA
GAAAACCCTAG

Upstream 100 bases:

>100_bases
GATGAGATTGGTGCTGGTGGAGCAGGTTTACCGGGCATTTCGGATTGTTCGGGGAGAGCCTTATCATAAATAGAACTTTT
TTATCAAAGGAGAATTCAAA

Downstream 100 bases:

>100_bases
ATTTTCAGGAATCTAGGGTTTTTTGTTCGCAGAGTTCGATGAATTGCTGGAAATCTTCTTGTTTGGCTAGTTTTTTTACG
AAGCTGCGTTCATTTAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKFLKKYGFYFLILAVLSDFLTPYILGIFYPGLNQMTRVMSVFGDVASPVRGAFLVWSVVSGVLFVLSLPAIYQSAIKQS
RTLAILLVSAIGLYGIGDCIFTGLFSIDTEQSSWTFSTWVHNIGSGLGYAGFLIFPLFLVILYRKKAEKTLSNLYLVLLI
VSLLSAGIYGLARIPAVNYLPVLDKIGFCQRISFFFNYLPMVVFGVDQIRRGYRKP

Sequences:

>Translated_216_residues
MKFLKKYGFYFLILAVLSDFLTPYILGIFYPGLNQMTRVMSVFGDVASPVRGAFLVWSVVSGVLFVLSLPAIYQSAIKQS
RTLAILLVSAIGLYGIGDCIFTGLFSIDTEQSSWTFSTWVHNIGSGLGYAGFLIFPLFLVILYRKKAEKTLSNLYLVLLI
VSLLSAGIYGLARIPAVNYLPVLDKIGFCQRISFFFNYLPMVVFGVDQIRRGYRKP
>Mature_216_residues
MKFLKKYGFYFLILAVLSDFLTPYILGIFYPGLNQMTRVMSVFGDVASPVRGAFLVWSVVSGVLFVLSLPAIYQSAIKQS
RTLAILLVSAIGLYGIGDCIFTGLFSIDTEQSSWTFSTWVHNIGSGLGYAGFLIFPLFLVILYRKKAEKTLSNLYLVLLI
VSLLSAGIYGLARIPAVNYLPVLDKIGFCQRISFFFNYLPMVVFGVDQIRRGYRKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24151; Mature: 24151

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLKKYGFYFLILAVLSDFLTPYILGIFYPGLNQMTRVMSVFGDVASPVRGAFLVWSVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGVLFVLSLPAIYQSAIKQSRTLAILLVSAIGLYGIGDCIFTGLFSIDTEQSSWTFSTWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
HNIGSGLGYAGFLIFPLFLVILYRKKAEKTLSNLYLVLLIVSLLSAGIYGLARIPAVNYL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
PVLDKIGFCQRISFFFNYLPMVVFGVDQIRRGYRKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKFLKKYGFYFLILAVLSDFLTPYILGIFYPGLNQMTRVMSVFGDVASPVRGAFLVWSVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGVLFVLSLPAIYQSAIKQSRTLAILLVSAIGLYGIGDCIFTGLFSIDTEQSSWTFSTWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
HNIGSGLGYAGFLIFPLFLVILYRKKAEKTLSNLYLVLLIVSLLSAGIYGLARIPAVNYL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
PVLDKIGFCQRISFFFNYLPMVVFGVDQIRRGYRKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA