| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is malL [H]
Identifier: 116871645
GI number: 116871645
Start: 233180
End: 234877
Strand: Direct
Name: malL [H]
Synonym: lwe0225
Alternate gene names: 116871645
Gene position: 233180-234877 (Clockwise)
Preceding gene: 116871644
Following gene: 116871646
Centisome position: 8.29
GC content: 34.81
Gene sequence:
>1698_bases ATGAAATTAACAGAAGCAAAAGAATGGTGGAAAGAATCGGTCGTTTATCAAATCTATCCACGTAGTTTTCAAGATTCCAA TGGTGATGGCATTGGAGATATTAGAGGGATTATTGAACGGCTTCCTTATTTAGCAGATTTAGGAATAAATGTGGTTTGGC TTTGTCCGGTCTATAAATCGCCTATGGATGATGGTGGCTATGATATTTCTGATTATTATCAGATTGATCCAATGTTCGGA ACAATGGACGATATGGATGAATTAATTGAAAAAGCTGGCGAATTAGGAATAAAAATATTAATGGATTTGGTGGTTAACCA TACGTCCGATGAACATGAATGGTTTCAAAAAGCATTGGCTAATCCAAAAAGTAAATACCGTGATTATTATATTTTTCGAG AAGGTATAAATGGGAATCCACCTAATAATTGGCGTTCTTATTTTGGTGGCTCTGCATGGGAACCTGTGCCTAGTGAGAGT AACATGTTTTATCTACATGCTTTTTCTAAAAAACAGCCTGATTTAAATTGGGAAAATATTGCGGTTCGTAATGAATGTAT CCAAATGATTAATTGGTGGCTTGAAAAAGGTTTAGGTGGATTTAGAATTGATGCTATTTTAAATTTGAAGAAAAGAATTG AATATGGTGTTTTCCCAGCGAACGGAGAAGATGGGTTAGTATTCATTGGTCATTGGATTTTAAATCAGCCTGGGATTGAG GAGTGGCTAAATGAAATTGATGAGCTTACATTTAAAAAACACAATGCGTTTACTGTGGCTGAAGCAGATGTACCAGAAGA AAGACTCTCTGAATATATAGGCGAAAATGGTCATTTTCGTATGGTCTTTGATTTTAGTTATACAGATATTGATACGCCTG AAACCGGAGAATGGTTTAAGCAGTCGAAATGGACTGTAAAAGAATTGAAAGACAAAATAATGATTAATGAATTGATAACA CAGCGAAATGGTTGGGGTGCCAAGTATTTAGAGAACCATGATCAACCACGTTCGATAAATAAGTATTTACCACAAGAATA TCAAGATGACCGTAGTAAAAAAATGTTAGCCGTTTTATTTATGATGTTACACGGAACTCCTTTCATATACCAAGGTCAAG AGATTGGTATGAGTAATATTCGAATGGATAGTATAACCGATTATAATGATATTGCCACACATGATCAATATCGTCGTGCT CTTCTTTCTGGAATGAGTCCTGACGAGGCACTTGAATGGATGTACCGTCGTAGTAGAGATAATTCGAGAACGCCAATGCA GTGGACTAATCAAAAGAATGCTGGCTTCTCAAATGCGGATGAGATTTGGTTGAAAACCAATCCTAATTATCATGAAATTA ATGTTGAGCAGGAACAAATGGATGAAACATCTGTATTAAATTTTTACAAGAAATTAATCTATTTAAGAAGTGATTTTAGT AAATATAAAGAAGTAACAATTTATGGTGAATTAGTACCAGTGGAATCAAGTGATACAGTTATTGCCTACAAACGGATAAT AGATGACAAAGAGCTCTTAATAGTTGTGAATTTTTCGGATGCTGAAGATCAATTATTCACAGAAGGCTGTTATGAACAGA TAATTGCCAATGTGGAGTTGCCAAAAATTGTGGAAAATAAATTTATTTTACCCGCTTATACAGGCGCCGTTTTTTCAAAA ATTTTGGAGGTAGAGTGA
Upstream 100 bases:
>100_bases TGATTGCAGTGCCAATTACAATACTGTTTATTTATTTACAAAAATATTATGTTGAAGGCATTACCAGTGGTGCTGTTAAA GGATAGGAGATAAATCAATA
Downstream 100 bases:
>100_bases TTGCAAATTAAAAATAAAGCGATGTTAATTACTTATTCTGATAGTCTGGGTCGAAATATGGAAGAACTTTATCAAATGAT GGAAACTTATTTTGAAGATG
Product: oligo-1,6-glucosidase
Products: NA
Alternate protein names: Dextrin 6-alpha-D-glucanohydrolase; Oligosaccharide alpha-1,6-glucosidase; Sucrase-isomaltase; Isomaltase [H]
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MKLTEAKEWWKESVVYQIYPRSFQDSNGDGIGDIRGIIERLPYLADLGINVVWLCPVYKSPMDDGGYDISDYYQIDPMFG TMDDMDELIEKAGELGIKILMDLVVNHTSDEHEWFQKALANPKSKYRDYYIFREGINGNPPNNWRSYFGGSAWEPVPSES NMFYLHAFSKKQPDLNWENIAVRNECIQMINWWLEKGLGGFRIDAILNLKKRIEYGVFPANGEDGLVFIGHWILNQPGIE EWLNEIDELTFKKHNAFTVAEADVPEERLSEYIGENGHFRMVFDFSYTDIDTPETGEWFKQSKWTVKELKDKIMINELIT QRNGWGAKYLENHDQPRSINKYLPQEYQDDRSKKMLAVLFMMLHGTPFIYQGQEIGMSNIRMDSITDYNDIATHDQYRRA LLSGMSPDEALEWMYRRSRDNSRTPMQWTNQKNAGFSNADEIWLKTNPNYHEINVEQEQMDETSVLNFYKKLIYLRSDFS KYKEVTIYGELVPVESSDTVIAYKRIIDDKELLIVVNFSDAEDQLFTEGCYEQIIANVELPKIVENKFILPAYTGAVFSK ILEVE
Sequences:
>Translated_565_residues MKLTEAKEWWKESVVYQIYPRSFQDSNGDGIGDIRGIIERLPYLADLGINVVWLCPVYKSPMDDGGYDISDYYQIDPMFG TMDDMDELIEKAGELGIKILMDLVVNHTSDEHEWFQKALANPKSKYRDYYIFREGINGNPPNNWRSYFGGSAWEPVPSES NMFYLHAFSKKQPDLNWENIAVRNECIQMINWWLEKGLGGFRIDAILNLKKRIEYGVFPANGEDGLVFIGHWILNQPGIE EWLNEIDELTFKKHNAFTVAEADVPEERLSEYIGENGHFRMVFDFSYTDIDTPETGEWFKQSKWTVKELKDKIMINELIT QRNGWGAKYLENHDQPRSINKYLPQEYQDDRSKKMLAVLFMMLHGTPFIYQGQEIGMSNIRMDSITDYNDIATHDQYRRA LLSGMSPDEALEWMYRRSRDNSRTPMQWTNQKNAGFSNADEIWLKTNPNYHEINVEQEQMDETSVLNFYKKLIYLRSDFS KYKEVTIYGELVPVESSDTVIAYKRIIDDKELLIVVNFSDAEDQLFTEGCYEQIIANVELPKIVENKFILPAYTGAVFSK ILEVE >Mature_565_residues MKLTEAKEWWKESVVYQIYPRSFQDSNGDGIGDIRGIIERLPYLADLGINVVWLCPVYKSPMDDGGYDISDYYQIDPMFG TMDDMDELIEKAGELGIKILMDLVVNHTSDEHEWFQKALANPKSKYRDYYIFREGINGNPPNNWRSYFGGSAWEPVPSES NMFYLHAFSKKQPDLNWENIAVRNECIQMINWWLEKGLGGFRIDAILNLKKRIEYGVFPANGEDGLVFIGHWILNQPGIE EWLNEIDELTFKKHNAFTVAEADVPEERLSEYIGENGHFRMVFDFSYTDIDTPETGEWFKQSKWTVKELKDKIMINELIT QRNGWGAKYLENHDQPRSINKYLPQEYQDDRSKKMLAVLFMMLHGTPFIYQGQEIGMSNIRMDSITDYNDIATHDQYRRA LLSGMSPDEALEWMYRRSRDNSRTPMQWTNQKNAGFSNADEIWLKTNPNYHEINVEQEQMDETSVLNFYKKLIYLRSDFS KYKEVTIYGELVPVESSDTVIAYKRIIDDKELLIVVNFSDAEDQLFTEGCYEQIIANVELPKIVENKFILPAYTGAVFSK ILEVE
Specific function: Unknown
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=542, Percent_Identity=29.520295202952, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI61744475, Length=135, Percent_Identity=31.8518518518519, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI61744477, Length=135, Percent_Identity=31.8518518518519, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI61744483, Length=135, Percent_Identity=31.8518518518519, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI61744479, Length=135, Percent_Identity=31.8518518518519, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI65506891, Length=135, Percent_Identity=31.8518518518519, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI61744481, Length=135, Percent_Identity=31.8518518518519, Blast_Score=77, Evalue=4e-14, Organism=Escherichia coli, GI1790687, Length=529, Percent_Identity=39.8865784499055, Blast_Score=372, Evalue=1e-104, Organism=Escherichia coli, GI1786604, Length=132, Percent_Identity=36.3636363636364, Blast_Score=89, Evalue=9e-19, Organism=Caenorhabditis elegans, GI32565753, Length=532, Percent_Identity=24.4360902255639, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI25147709, Length=498, Percent_Identity=26.1044176706827, Blast_Score=107, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6321731, Length=545, Percent_Identity=37.0642201834862, Blast_Score=318, Evalue=1e-87, Organism=Saccharomyces cerevisiae, GI6319776, Length=545, Percent_Identity=37.0642201834862, Blast_Score=318, Evalue=2e-87, Organism=Saccharomyces cerevisiae, GI6321726, Length=550, Percent_Identity=37.4545454545455, Blast_Score=309, Evalue=6e-85, Organism=Saccharomyces cerevisiae, GI6322245, Length=547, Percent_Identity=34.5521023765996, Blast_Score=304, Evalue=2e-83, Organism=Saccharomyces cerevisiae, GI6322241, Length=545, Percent_Identity=37.7981651376147, Blast_Score=302, Evalue=1e-82, Organism=Saccharomyces cerevisiae, GI6322021, Length=545, Percent_Identity=37.7981651376147, Blast_Score=302, Evalue=1e-82, Organism=Saccharomyces cerevisiae, GI6324416, Length=545, Percent_Identity=37.7981651376147, Blast_Score=301, Evalue=3e-82, Organism=Drosophila melanogaster, GI24583745, Length=538, Percent_Identity=37.7323420074349, Blast_Score=304, Evalue=1e-82, Organism=Drosophila melanogaster, GI24583749, Length=541, Percent_Identity=36.7837338262477, Blast_Score=292, Evalue=5e-79, Organism=Drosophila melanogaster, GI24583747, Length=541, Percent_Identity=36.7837338262477, Blast_Score=291, Evalue=6e-79, Organism=Drosophila melanogaster, GI24586593, Length=557, Percent_Identity=35.1885098743267, Blast_Score=286, Evalue=3e-77, Organism=Drosophila melanogaster, GI24586599, Length=536, Percent_Identity=34.5149253731343, Blast_Score=275, Evalue=5e-74, Organism=Drosophila melanogaster, GI24586587, Length=565, Percent_Identity=32.5663716814159, Blast_Score=271, Evalue=7e-73, Organism=Drosophila melanogaster, GI45549022, Length=599, Percent_Identity=32.7212020033389, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI24586589, Length=561, Percent_Identity=32.0855614973262, Blast_Score=264, Evalue=1e-70, Organism=Drosophila melanogaster, GI24586597, Length=538, Percent_Identity=33.0855018587361, Blast_Score=261, Evalue=1e-69, Organism=Drosophila melanogaster, GI24586591, Length=506, Percent_Identity=33.596837944664, Blast_Score=259, Evalue=4e-69, Organism=Drosophila melanogaster, GI221330053, Length=207, Percent_Identity=48.792270531401, Blast_Score=216, Evalue=4e-56, Organism=Drosophila melanogaster, GI281360393, Length=503, Percent_Identity=32.4055666003976, Blast_Score=206, Evalue=4e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =3.2.1.10 [H]
Molecular weight: Translated: 66015; Mature: 66015
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTEAKEWWKESVVYQIYPRSFQDSNGDGIGDIRGIIERLPYLADLGINVVWLCPVYKS CCCCHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCEEEEECCCCC PMDDGGYDISDYYQIDPMFGTMDDMDELIEKAGELGIKILMDLVVNHTSDEHEWFQKALA CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC NPKSKYRDYYIFREGINGNPPNNWRSYFGGSAWEPVPSESNMFYLHAFSKKQPDLNWENI CCHHHHCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHH AVRNECIQMINWWLEKGLGGFRIDAILNLKKRIEYGVFPANGEDGLVFIGHWILNQPGIE HHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHCCCCCHH EWLNEIDELTFKKHNAFTVAEADVPEERLSEYIGENGHFRMVFDFSYTDIDTPETGEWFK HHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHH QSKWTVKELKDKIMINELITQRNGWGAKYLENHDQPRSINKYLPQEYQDDRSKKMLAVLF HCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHH MMLHGTPFIYQGQEIGMSNIRMDSITDYNDIATHDQYRRALLSGMSPDEALEWMYRRSRD HHHCCCCEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC NSRTPMQWTNQKNAGFSNADEIWLKTNPNYHEINVEQEQMDETSVLNFYKKLIYLRSDFS CCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH KYKEVTIYGELVPVESSDTVIAYKRIIDDKELLIVVNFSDAEDQLFTEGCYEQIIANVEL HHCEEEEEEEEEECCCCCCEEEHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCC PKIVENKFILPAYTGAVFSKILEVE CHHHHCCEEEEHHHHHHHHHHHCCC >Mature Secondary Structure MKLTEAKEWWKESVVYQIYPRSFQDSNGDGIGDIRGIIERLPYLADLGINVVWLCPVYKS CCCCHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCEEEEECCCCC PMDDGGYDISDYYQIDPMFGTMDDMDELIEKAGELGIKILMDLVVNHTSDEHEWFQKALA CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC NPKSKYRDYYIFREGINGNPPNNWRSYFGGSAWEPVPSESNMFYLHAFSKKQPDLNWENI CCHHHHCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHH AVRNECIQMINWWLEKGLGGFRIDAILNLKKRIEYGVFPANGEDGLVFIGHWILNQPGIE HHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHCCCCCHH EWLNEIDELTFKKHNAFTVAEADVPEERLSEYIGENGHFRMVFDFSYTDIDTPETGEWFK HHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHH QSKWTVKELKDKIMINELITQRNGWGAKYLENHDQPRSINKYLPQEYQDDRSKKMLAVLF HCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHH MMLHGTPFIYQGQEIGMSNIRMDSITDYNDIATHDQYRRALLSGMSPDEALEWMYRRSRD HHHCCCCEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC NSRTPMQWTNQKNAGFSNADEIWLKTNPNYHEINVEQEQMDETSVLNFYKKLIYLRSDFS CCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH KYKEVTIYGELVPVESSDTVIAYKRIIDDKELLIVVNFSDAEDQLFTEGCYEQIIANVEL HHCEEEEEEEEEECCCCCCEEEHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCC PKIVENKFILPAYTGAVFSKILEVE CHHHHCCEEEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2120057; 8370659; 9193006 [H]