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The map label for this gene is rsmI [H]

Identifier: 116871568

GI number: 116871568

Start: 147922

End: 148803

Strand: Direct

Name: rsmI [H]

Synonym: lwe0148

Alternate gene names: 116871568

Gene position: 147922-148803 (Clockwise)

Preceding gene: 116871567

Following gene: 116871570

Centisome position: 5.26

GC content: 38.21

Gene sequence:

>882_bases
ATGATAAAGAGTCAAAAAAGTTTCAGCGGAGACGTTCGAGGAGCACTGTACTTAGTTCCAACACCAATAGGAAATTTAGA
AGATATGACATTTCGGGCGATTCGTATGTTAAAAGAAGCCGATATTATTGCTGCTGAAGATACGCGAAATACAGTAAAAC
TTTTAAATCATTTTGAAATTACTACTCGAATGACAAGTTATCATCAGTTCACAAAAGAAAATAAAGAGGATAATATCATT
CAGCGTATGCTAGACGGGGAAGTGGTTGCACTAGTTAGTGATGCGGGGATGCCTTCTATTTCTGATCCGGGTTATGAACT
TGTCCAAAGGGCGCTAAATGCTAGTATTCCAGTGATTCCATTACCTGGAGCAAATGCTGCTTTAACCGCCTTAATCGCAT
CTGGTTTAGCACCACAGCCGTTTTATTTTTATGGATTTCTCCCAAGACAAAATAAAGAACGTACCCAAGAAATCGAAAAA
TTAGCGGCACGTGAGGAAACTTGGATTTTGTATGAATCGCCACATCGTCTAAAAGAAACATTAAAAGCAATCATTAAAAT
CACTGGAAATGATCGGAAAATAGTTTTATGTCGTGAACTTACCAAACGATTTGAAGAATTTTTGCGGGGGACCGTAGAAG
ATGCGCTTAACTGGGCGACAGACGAAGAAGTACGCGGAGAATTTTGTATTATTATTGAAGGAAATGCAAATCCACCTGTA
GCAGAAGAACTTCTCTGGTGGCAAGAAATGGATATTAAAACACATGTCACTACTGTGATGGAGCAAGAAAATGTTAGCTC
TAAAGACGCGATAAAAACGGTTATGAAAGCTAGAAATCTACCAAAACGCGAAGTTTATGCCGCTTATCATGAAATAAAAT
AA

Upstream 100 bases:

>100_bases
TTGAAACGAGAAGTGAGGCCACGAAGGCAGAAGCTGCATTCAAAAAACTATCACGTAAAAATAAAGACAGCTATTTAATC
GAGCGGGAGGAGGATTCAGA

Downstream 100 bases:

>100_bases
AATCATGCGCGAGGTTCTTTTTCAGACCTCTTGCATGATTTTTTATAACGTATCGCCAAAGCGCCTTTTAATTTCTTCCA
TCAACTCTGCGGCGCCTTCT

Product: tetrapyrrole methylase family protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MIKSQKSFSGDVRGALYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNTVKLLNHFEITTRMTSYHQFTKENKEDNII
QRMLDGEVVALVSDAGMPSISDPGYELVQRALNASIPVIPLPGANAALTALIASGLAPQPFYFYGFLPRQNKERTQEIEK
LAAREETWILYESPHRLKETLKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNWATDEEVRGEFCIIIEGNANPPV
AEELLWWQEMDIKTHVTTVMEQENVSSKDAIKTVMKARNLPKREVYAAYHEIK

Sequences:

>Translated_293_residues
MIKSQKSFSGDVRGALYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNTVKLLNHFEITTRMTSYHQFTKENKEDNII
QRMLDGEVVALVSDAGMPSISDPGYELVQRALNASIPVIPLPGANAALTALIASGLAPQPFYFYGFLPRQNKERTQEIEK
LAAREETWILYESPHRLKETLKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNWATDEEVRGEFCIIIEGNANPPV
AEELLWWQEMDIKTHVTTVMEQENVSSKDAIKTVMKARNLPKREVYAAYHEIK
>Mature_293_residues
MIKSQKSFSGDVRGALYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNTVKLLNHFEITTRMTSYHQFTKENKEDNII
QRMLDGEVVALVSDAGMPSISDPGYELVQRALNASIPVIPLPGANAALTALIASGLAPQPFYFYGFLPRQNKERTQEIEK
LAAREETWILYESPHRLKETLKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNWATDEEVRGEFCIIIEGNANPPV
AEELLWWQEMDIKTHVTTVMEQENVSSKDAIKTVMKARNLPKREVYAAYHEIK

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=233, Percent_Identity=44.206008583691, Blast_Score=203, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 33340; Mature: 33340

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSQKSFSGDVRGALYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNTVKLLNHFEI
CCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHH
TTRMTSYHQFTKENKEDNIIQRMLDGEVVALVSDAGMPSISDPGYELVQRALNASIPVIP
HHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEE
LPGANAALTALIASGLAPQPFYFYGFLPRQNKERTQEIEKLAAREETWILYESPHRLKET
CCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHH
LKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNWATDEEVRGEFCIIIEGNANPPV
HHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEEEECCCCCCH
AEELLWWQEMDIKTHVTTVMEQENVSSKDAIKTVMKARNLPKREVYAAYHEIK
HHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MIKSQKSFSGDVRGALYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNTVKLLNHFEI
CCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHH
TTRMTSYHQFTKENKEDNIIQRMLDGEVVALVSDAGMPSISDPGYELVQRALNASIPVIP
HHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEE
LPGANAALTALIASGLAPQPFYFYGFLPRQNKERTQEIEKLAAREETWILYESPHRLKET
CCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHH
LKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNWATDEEVRGEFCIIIEGNANPPV
HHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEEEECCCCCCH
AEELLWWQEMDIKTHVTTVMEQENVSSKDAIKTVMKARNLPKREVYAAYHEIK
HHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]