| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
Click here to switch to the map view.
The map label for this gene is 116871570
Identifier: 116871570
GI number: 116871570
Start: 149245
End: 150102
Strand: Direct
Name: 116871570
Synonym: lwe0150
Alternate gene names: NA
Gene position: 149245-150102 (Clockwise)
Preceding gene: 116871568
Following gene: 116871571
Centisome position: 5.3
GC content: 35.08
Gene sequence:
>858_bases ATGAACATAGTTATAGCATTAATTCCAGCAGTTATGTGGGGGATTATGCCACTAGTTGTATCCAAAATCGGCGGAAAACC AAAGCAACAAATTATTGGAACAACTTTAGGGGCGTTAGTTTTTGCGTTAGGCGTTTTCTTTTTTACAAATCCAGAATATA CGGCAACGATTATTATTGCTAGTTTTATTTCAGGGGCTTTTTGGAGTTTAGGGCAAATGAATCAATTTCGTGCCTTTACT CAAGTTGGCGTATCCAAAACAATGCCACTTTCAACCGGGATGCAATTAGTAGGTACATCTCTTTTTGGTGTTTTTGCATT TCATGAGTGGGGTACAACATCTAAATTAGTACTAGGTTTTTCGGCGTTAGCACTTATTATTATAGGTATATTTTTAACAA GTTACCAACAAAATAAAGACGAAAATTCCGGACAAAATATGAAAAAAGGAATTATTACTTTACTTATTTCTTCCGTTGGT TATGTTGGTTATGTCGTTATTACGCGCTGGTTTGATATTAGTGGTTGGGATGCGATTTTGCCACAAGCGATTGGGATGGT TATAGCAGGATTACTATTTTCCATTAAATCCGAAGAAAAGCGTTTTACAAAACAAACTTGGTTAAATATGATTCCGGGTA TTATGTGGGCTACAGGTAATTTAGCACTATTATTCTCTAATAAATTAGTTGGGATTGCAACTGGATTTTCTCTTTCACAA ATGGGTGTTGTCATTTCAACCATTGGGGGAATACTTTTCTTAGGAGAGAAAAAGACCAAGAAAGAACTTGTTCTCGTTAT TATTGGAGTCATTTTAGTTATTATTGGTGGAACAATGATTGGAATTGCTAAGAGTTAA
Upstream 100 bases:
>100_bases GATAATTTTAATTCATTTTAACAGATAATGACTAGAATAGGAATGATTTCGGGTGAAAAGGGTATAGACCATAAGTATAA GAATTAGGGGGAATAAAAAA
Downstream 100 bases:
>100_bases GTTTTCAATTAAGGACGTGCTATACTTATTTTAATCTAAATTAAAGGTGGTTATATTGAGTATGAATGCGAAATTAGAAG TAAATGCAGAAATGATAAAA
Product: glucose uptake protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MNIVIALIPAVMWGIMPLVVSKIGGKPKQQIIGTTLGALVFALGVFFFTNPEYTATIIIASFISGAFWSLGQMNQFRAFT QVGVSKTMPLSTGMQLVGTSLFGVFAFHEWGTTSKLVLGFSALALIIIGIFLTSYQQNKDENSGQNMKKGIITLLISSVG YVGYVVITRWFDISGWDAILPQAIGMVIAGLLFSIKSEEKRFTKQTWLNMIPGIMWATGNLALLFSNKLVGIATGFSLSQ MGVVISTIGGILFLGEKKTKKELVLVIIGVILVIIGGTMIGIAKS
Sequences:
>Translated_285_residues MNIVIALIPAVMWGIMPLVVSKIGGKPKQQIIGTTLGALVFALGVFFFTNPEYTATIIIASFISGAFWSLGQMNQFRAFT QVGVSKTMPLSTGMQLVGTSLFGVFAFHEWGTTSKLVLGFSALALIIIGIFLTSYQQNKDENSGQNMKKGIITLLISSVG YVGYVVITRWFDISGWDAILPQAIGMVIAGLLFSIKSEEKRFTKQTWLNMIPGIMWATGNLALLFSNKLVGIATGFSLSQ MGVVISTIGGILFLGEKKTKKELVLVIIGVILVIIGGTMIGIAKS >Mature_285_residues MNIVIALIPAVMWGIMPLVVSKIGGKPKQQIIGTTLGALVFALGVFFFTNPEYTATIIIASFISGAFWSLGQMNQFRAFT QVGVSKTMPLSTGMQLVGTSLFGVFAFHEWGTTSKLVLGFSALALIIIGIFLTSYQQNKDENSGQNMKKGIITLLISSVG YVGYVVITRWFDISGWDAILPQAIGMVIAGLLFSIKSEEKRFTKQTWLNMIPGIMWATGNLALLFSNKLVGIATGFSLSQ MGVVISTIGGILFLGEKKTKKELVLVIIGVILVIIGGTMIGIAKS
Specific function: Unknown
COG id: COG4975
COG function: function code G; Putative glucose uptake permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GRP transporter (TC 2.A.7.5) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010651 [H]
Pfam domain/function: PF06800 Sugar_transport [H]
EC number: NA
Molecular weight: Translated: 30656; Mature: 30656
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIVIALIPAVMWGIMPLVVSKIGGKPKQQIIGTTLGALVFALGVFFFTNPEYTATIIIA CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH SFISGAFWSLGQMNQFRAFTQVGVSKTMPLSTGMQLVGTSLFGVFAFHEWGTTSKLVLGF HHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH SALALIIIGIFLTSYQQNKDENSGQNMKKGIITLLISSVGYVGYVVITRWFDISGWDAIL HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH PQAIGMVIAGLLFSIKSEEKRFTKQTWLNMIPGIMWATGNLALLFSNKLVGIATGFSLSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCEEEEECCCEEEEECCCCHHH MGVVISTIGGILFLGEKKTKKELVLVIIGVILVIIGGTMIGIAKS HHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCCHHEEECCC >Mature Secondary Structure MNIVIALIPAVMWGIMPLVVSKIGGKPKQQIIGTTLGALVFALGVFFFTNPEYTATIIIA CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH SFISGAFWSLGQMNQFRAFTQVGVSKTMPLSTGMQLVGTSLFGVFAFHEWGTTSKLVLGF HHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH SALALIIIGIFLTSYQQNKDENSGQNMKKGIITLLISSVGYVGYVVITRWFDISGWDAIL HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH PQAIGMVIAGLLFSIKSEEKRFTKQTWLNMIPGIMWATGNLALLFSNKLVGIATGFSLSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCEEEEECCCEEEEECCCCHHH MGVVISTIGGILFLGEKKTKKELVLVIIGVILVIIGGTMIGIAKS HHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCCHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]