| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871546
Identifier: 116871546
GI number: 116871546
Start: 125680
End: 126087
Strand: Direct
Name: 116871546
Synonym: lwe0126
Alternate gene names: NA
Gene position: 125680-126087 (Clockwise)
Preceding gene: 116871545
Following gene: 116871547
Centisome position: 4.47
GC content: 29.41
Gene sequence:
>408_bases TTGGATCAAAAAATAAAGGATATCTATCATATAGATGACTCTTTTTCTATTGATAACGAAAAATACAATAAGTGGCTAAA ATCATTGTTTAATAAAACTAAAGACGAAATTACGGAAAAGGATGTATATACGATGCTTCTGCAACAAGAACTAGAGGATT TAGCCATTGAAAAAGCAATTGAGTTTATTAAAATAGACCCATTAACTGGAGAAATGTGGGATGGACAACTTTTAGAACAG TTAGCAGGAATATCAGCCGATAAATTGGTAGCTTACAAAGAGGATTTGCAAAAATTAATACCTTATATAGACATTCAAAT TAAGGAACCTTTATGGGATTTTGAATTTGAAAGAGAAGACTTTATATCCAGATATATGAAGTTTAAAGATAAAGTGGCTG ATTTATAA
Upstream 100 bases:
>100_bases ATAAGAAAGTAAGAGTTTATTTGGAAAGTAAATTAAAAGAAGTTAATTTGCAAATAAATAAAATAGAACACCTATTTGAT GATTATGGAGGTATACAAAA
Downstream 100 bases:
>100_bases GATGTGTATTGAAGAGGTTTACTAGCATGCTTACAAATAACAAAATGGAAAATATCAAGAATGTAATTAAATTAGTAGAA GAATATTTCTCTTCCTCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MDQKIKDIYHIDDSFSIDNEKYNKWLKSLFNKTKDEITEKDVYTMLLQQELEDLAIEKAIEFIKIDPLTGEMWDGQLLEQ LAGISADKLVAYKEDLQKLIPYIDIQIKEPLWDFEFEREDFISRYMKFKDKVADL
Sequences:
>Translated_135_residues MDQKIKDIYHIDDSFSIDNEKYNKWLKSLFNKTKDEITEKDVYTMLLQQELEDLAIEKAIEFIKIDPLTGEMWDGQLLEQ LAGISADKLVAYKEDLQKLIPYIDIQIKEPLWDFEFEREDFISRYMKFKDKVADL >Mature_135_residues MDQKIKDIYHIDDSFSIDNEKYNKWLKSLFNKTKDEITEKDVYTMLLQQELEDLAIEKAIEFIKIDPLTGEMWDGQLLEQ LAGISADKLVAYKEDLQKLIPYIDIQIKEPLWDFEFEREDFISRYMKFKDKVADL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16164; Mature: 16164
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQKIKDIYHIDDSFSIDNEKYNKWLKSLFNKTKDEITEKDVYTMLLQQELEDLAIEKAI CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFIKIDPLTGEMWDGQLLEQLAGISADKLVAYKEDLQKLIPYIDIQIKEPLWDFEFERED HHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCHHH FISRYMKFKDKVADL HHHHHHHHHHHHCCC >Mature Secondary Structure MDQKIKDIYHIDDSFSIDNEKYNKWLKSLFNKTKDEITEKDVYTMLLQQELEDLAIEKAI CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFIKIDPLTGEMWDGQLLEQLAGISADKLVAYKEDLQKLIPYIDIQIKEPLWDFEFERED HHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCHHH FISRYMKFKDKVADL HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA