| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871547
Identifier: 116871547
GI number: 116871547
Start: 126114
End: 126479
Strand: Direct
Name: 116871547
Synonym: lwe0127
Alternate gene names: NA
Gene position: 126114-126479 (Clockwise)
Preceding gene: 116871546
Following gene: 116871549
Centisome position: 4.48
GC content: 27.32
Gene sequence:
>366_bases ATGCTTACAAATAACAAAATGGAAAATATCAAGAATGTAATTAAATTAGTAGAAGAATATTTCTCTTCCTCTGTTTCTAG TTTTCAAGTAGAAACAGAGGAAGACGCACAAGAATTTTTTATTGATTGTCTAATTTATAGAAGTTATTGGATTCAACTTA GTTTGACTGATGTTGAAAAAGGCGGAGTTTTTAATATTGATGTGTCAATTGGTAAAAATACTGCTCTTTACTCTCTTATT GAGAATGGGGAAGATTTATCTATATATTTTGATAAAGATTCAGTATACAAAAATCTTACCATCCTAGATAACTATCTAAA ATGGAGAATGACTGATGAGCAAAAGAGAACATTTAATATTTTATAA
Upstream 100 bases:
>100_bases GGGATTTTGAATTTGAAAGAGAAGACTTTATATCCAGATATATGAAGTTTAAAGATAAAGTGGCTGATTTATAAGATGTG TATTGAAGAGGTTTACTAGC
Downstream 100 bases:
>100_bases AATAAATTTAGTTAATTTAATTACGAAAGCTGAAGAGGGCAAACCTCTGGTTATTCATCACAGTTTTTGAAGGATTTAAT AACTTTATACAACAAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MLTNNKMENIKNVIKLVEEYFSSSVSSFQVETEEDAQEFFIDCLIYRSYWIQLSLTDVEKGGVFNIDVSIGKNTALYSLI ENGEDLSIYFDKDSVYKNLTILDNYLKWRMTDEQKRTFNIL
Sequences:
>Translated_121_residues MLTNNKMENIKNVIKLVEEYFSSSVSSFQVETEEDAQEFFIDCLIYRSYWIQLSLTDVEKGGVFNIDVSIGKNTALYSLI ENGEDLSIYFDKDSVYKNLTILDNYLKWRMTDEQKRTFNIL >Mature_121_residues MLTNNKMENIKNVIKLVEEYFSSSVSSFQVETEEDAQEFFIDCLIYRSYWIQLSLTDVEKGGVFNIDVSIGKNTALYSLI ENGEDLSIYFDKDSVYKNLTILDNYLKWRMTDEQKRTFNIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14223; Mature: 14223
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTNNKMENIKNVIKLVEEYFSSSVSSFQVETEEDAQEFFIDCLIYRSYWIQLSLTDVEK CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHEEEEEEEEECCC GGVFNIDVSIGKNTALYSLIENGEDLSIYFDKDSVYKNLTILDNYLKWRMTDEQKRTFNI CCEEEEEEEECCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHEEECCCCCEEECC L C >Mature Secondary Structure MLTNNKMENIKNVIKLVEEYFSSSVSSFQVETEEDAQEFFIDCLIYRSYWIQLSLTDVEK CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHEEEEEEEEECCC GGVFNIDVSIGKNTALYSLIENGEDLSIYFDKDSVYKNLTILDNYLKWRMTDEQKRTFNI CCEEEEEEEECCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHEEECCCCCEEECC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA