Click here to switch to the map view.

The map label for this gene is lmaD

Identifier: 116871528

GI number: 116871528

Start: 110463

End: 110891

Strand: Direct

Name: lmaD

Synonym: lwe0108

Alternate gene names: NA

Gene position: 110463-110891 (Clockwise)

Preceding gene: 116871525

Following gene: 116871529

Centisome position: 3.93

GC content: 33.33

Gene sequence:

>429_bases
ATGGATAGACAACTTTTAAAAGAAAAGCAAATCCAACTGATTTTTCAACTTGAACAAGAAGAAAATAGATTTATTCGGAA
GCGTTTAATAGAAGAGTTGGAGTATTTTGAAGCACTTGGAGATAGAGAAAAAGGGCTTTTAACGGCAGAACAAAAATTAC
TTATATTAACACCTAGCGAATACAGAGAATATAAAAAGACAAAATCAGATGTACAAATTAGCAAATTAATTGGAGTTTCA
AGGTCATCACTTGCTGATTGGAAACGTAAAAAGGGATTAAATAGAAAAAAGCGGCAGTCAGTTCAACGGGAGATGATTGA
GGTTTTAGCTTTTCATCTAGATAAGTCAGAAGAAGAAATTGGCTCTTTGCCAGCTTCGGCTATTGAATGCCAGTATGAGG
CTTTTGTAATTAATGAATCCCATAATTAA

Upstream 100 bases:

>100_bases
TTGTAGAGCTAGAAAATAAATGAGGTTTCATTTCGCATCATAAGCACCATTTTGGTGACAAAAGTAACCTTATAAAATTA
TGAGATGGAAGTGGGAATGG

Downstream 100 bases:

>100_bases
GGAGTGATCAAATGCAAGTTTTAGTTTTACCAGAAAATAAAGATATCAATTATATCAAGACAGTGCATGAAGTAAAACGA
TTTTTTACTGATTTTCAGCG

Product: antigen D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MDRQLLKEKQIQLIFQLEQEENRFIRKRLIEELEYFEALGDREKGLLTAEQKLLILTPSEYREYKKTKSDVQISKLIGVS
RSSLADWKRKKGLNRKKRQSVQREMIEVLAFHLDKSEEEIGSLPASAIECQYEAFVINESHN

Sequences:

>Translated_142_residues
MDRQLLKEKQIQLIFQLEQEENRFIRKRLIEELEYFEALGDREKGLLTAEQKLLILTPSEYREYKKTKSDVQISKLIGVS
RSSLADWKRKKGLNRKKRQSVQREMIEVLAFHLDKSEEEIGSLPASAIECQYEAFVINESHN
>Mature_142_residues
MDRQLLKEKQIQLIFQLEQEENRFIRKRLIEELEYFEALGDREKGLLTAEQKLLILTPSEYREYKKTKSDVQISKLIGVS
RSSLADWKRKKGLNRKKRQSVQREMIEVLAFHLDKSEEEIGSLPASAIECQYEAFVINESHN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16785; Mature: 16785

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRQLLKEKQIQLIFQLEQEENRFIRKRLIEELEYFEALGDREKGLLTAEQKLLILTPSE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEECCHH
YREYKKTKSDVQISKLIGVSRSSLADWKRKKGLNRKKRQSVQREMIEVLAFHLDKSEEEI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
GSLPASAIECQYEAFVINESHN
HCCCHHHHHHHHEEEEEECCCC
>Mature Secondary Structure
MDRQLLKEKQIQLIFQLEQEENRFIRKRLIEELEYFEALGDREKGLLTAEQKLLILTPSE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEECCHH
YREYKKTKSDVQISKLIGVSRSSLADWKRKKGLNRKKRQSVQREMIEVLAFHLDKSEEEI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
GSLPASAIECQYEAFVINESHN
HCCCHHHHHHHHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA