Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

Click here to switch to the map view.

The map label for this gene is 116871525

Identifier: 116871525

GI number: 116871525

Start: 108345

End: 109418

Strand: Direct

Name: 116871525

Synonym: lwe0105

Alternate gene names: NA

Gene position: 108345-109418 (Clockwise)

Preceding gene: 116871524

Following gene: 116871528

Centisome position: 3.85

GC content: 31.1

Gene sequence:

>1074_bases
ATGAGTAAGGAACCAAATGATGAATTAGAAGACTTGTTTGATATAGAAAAAATGAGCAAAGAAGTAAAAAAAGTAAAGCG
TCGTAGCATTTCTAAAACATCAGTAATCATTATCGGGATTGTATTACTTATTCTTGCTGGGGTACTTGGTTATTTATATA
TTTCTAACAAAGTAGCTTCGGATAAAGCAAGAAAACAAGCAGAAAATCATGTAGCTTTCGTAACAACTATCAATGAATTC
TATAAATATCCGAATACCATTCTTCAGACATCTACAGAAATAAGTGATAATAATCGTAAAGTGGAGATATCAGAGGTGAA
TTTCAAATTATTAAAAGATAGATTTATTCCGTTTACTACAGCAACTATGAGTTTAGATTCAGATGGTATAGGCTCAGGCT
ATCCTACAATAGAAATTAATTTAGAAGAGAAAGAAAAAGACGGGGAGAAATATAAAGTTGGTATTAATGATTTAACAACT
GGAAATAGATTAGCTGATTATTACCATCCTTTGAAAAAATATTCTTCTATGAAACAAGATTTGAAAAAATTAAGCGAATT
TCCTAAAAACACCTATTTAGAGATGGCTATCTCTTTTGATAAAGCTTATTCCTCTCTAGAAGTGGAAAAAATGTTACCCA
ATAATTTAAAACCAACGTTCTTTTGGTTAGATGGTTATGATCTTTCTATTGATGACATGCCTTCACCCCTTAATGAACAA
TTATATGGTTATGATAATCCCAATACTAATTTAGAGAATAAATTCTGGACAAATCCAATAGAAGACGAACAAGATTATAT
CAAACAAATGAAGTTGAGCAACTTTACTTTCTATTCTAATGGAAGTATTTCACAAGATGGTACAGTATATGGTTCTGGTA
AAAGCGTTTATAAGGTTTTAAAAACTAAATCCGATAAAGGAGAAAAGTTGGTTATCGGAATTTCCATCGTTGCCACTAAA
GAAGAATTACAGCAATTAGCCAATGTAAATTATATCCGAGCATCAAGTGTAGGCGTAATTTCAAACGCAGTAGATGCAGC
AAACTACTACGAACAAACTGGGGAAATCAATTGA

Upstream 100 bases:

>100_bases
TATCAGGAAATTGCAGAGTATTTGGATACAACTCCATCTAACGTGAAGACCTATTTATCAAGAGCTAGAAGTGCCTTTAA
GAAAATCTGGGGGGATTTTA

Downstream 100 bases:

>100_bases
AAAAGGACACTCTGGATTTTCAGAGTGTCCATTTAAAATTTTTTATACACATCGATAGAGTTGCCAAAATTGATTAGATA
ATCCCCGCAATCATACATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MSKEPNDELEDLFDIEKMSKEVKKVKRRSISKTSVIIIGIVLLILAGVLGYLYISNKVASDKARKQAENHVAFVTTINEF
YKYPNTILQTSTEISDNNRKVEISEVNFKLLKDRFIPFTTATMSLDSDGIGSGYPTIEINLEEKEKDGEKYKVGINDLTT
GNRLADYYHPLKKYSSMKQDLKKLSEFPKNTYLEMAISFDKAYSSLEVEKMLPNNLKPTFFWLDGYDLSIDDMPSPLNEQ
LYGYDNPNTNLENKFWTNPIEDEQDYIKQMKLSNFTFYSNGSISQDGTVYGSGKSVYKVLKTKSDKGEKLVIGISIVATK
EELQQLANVNYIRASSVGVISNAVDAANYYEQTGEIN

Sequences:

>Translated_357_residues
MSKEPNDELEDLFDIEKMSKEVKKVKRRSISKTSVIIIGIVLLILAGVLGYLYISNKVASDKARKQAENHVAFVTTINEF
YKYPNTILQTSTEISDNNRKVEISEVNFKLLKDRFIPFTTATMSLDSDGIGSGYPTIEINLEEKEKDGEKYKVGINDLTT
GNRLADYYHPLKKYSSMKQDLKKLSEFPKNTYLEMAISFDKAYSSLEVEKMLPNNLKPTFFWLDGYDLSIDDMPSPLNEQ
LYGYDNPNTNLENKFWTNPIEDEQDYIKQMKLSNFTFYSNGSISQDGTVYGSGKSVYKVLKTKSDKGEKLVIGISIVATK
EELQQLANVNYIRASSVGVISNAVDAANYYEQTGEIN
>Mature_356_residues
SKEPNDELEDLFDIEKMSKEVKKVKRRSISKTSVIIIGIVLLILAGVLGYLYISNKVASDKARKQAENHVAFVTTINEFY
KYPNTILQTSTEISDNNRKVEISEVNFKLLKDRFIPFTTATMSLDSDGIGSGYPTIEINLEEKEKDGEKYKVGINDLTTG
NRLADYYHPLKKYSSMKQDLKKLSEFPKNTYLEMAISFDKAYSSLEVEKMLPNNLKPTFFWLDGYDLSIDDMPSPLNEQL
YGYDNPNTNLENKFWTNPIEDEQDYIKQMKLSNFTFYSNGSISQDGTVYGSGKSVYKVLKTKSDKGEKLVIGISIVATKE
ELQQLANVNYIRASSVGVISNAVDAANYYEQTGEIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40498; Mature: 40367

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKEPNDELEDLFDIEKMSKEVKKVKRRSISKTSVIIIGIVLLILAGVLGYLYISNKVAS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
DKARKQAENHVAFVTTINEFYKYPNTILQTSTEISDNNRKVEISEVNFKLLKDRFIPFTT
HHHHHHHHCCEEEEEEHHHHHHCCHHHHHCCCCCCCCCCEEEEECCHHHHHHHCCCCEEE
ATMSLDSDGIGSGYPTIEINLEEKEKDGEKYKVGINDLTTGNRLADYYHPLKKYSSMKQD
EEEEECCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
LKKLSEFPKNTYLEMAISFDKAYSSLEVEKMLPNNLKPTFFWLDGYDLSIDDMPSPLNEQ
HHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCEECCCCCCCCCHHHC
LYGYDNPNTNLENKFWTNPIEDEQDYIKQMKLSNFTFYSNGSISQDGTVYGSGKSVYKVL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCEEEECCHHHHHHH
KTKSDKGEKLVIGISIVATKEELQQLANVNYIRASSVGVISNAVDAANYYEQTGEIN
HCCCCCCCEEEEEEEEEECHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SKEPNDELEDLFDIEKMSKEVKKVKRRSISKTSVIIIGIVLLILAGVLGYLYISNKVAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
DKARKQAENHVAFVTTINEFYKYPNTILQTSTEISDNNRKVEISEVNFKLLKDRFIPFTT
HHHHHHHHCCEEEEEEHHHHHHCCHHHHHCCCCCCCCCCEEEEECCHHHHHHHCCCCEEE
ATMSLDSDGIGSGYPTIEINLEEKEKDGEKYKVGINDLTTGNRLADYYHPLKKYSSMKQD
EEEEECCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
LKKLSEFPKNTYLEMAISFDKAYSSLEVEKMLPNNLKPTFFWLDGYDLSIDDMPSPLNEQ
HHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCEECCCCCCCCCHHHC
LYGYDNPNTNLENKFWTNPIEDEQDYIKQMKLSNFTFYSNGSISQDGTVYGSGKSVYKVL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCEEEECCHHHHHHH
KTKSDKGEKLVIGISIVATKEELQQLANVNYIRASSVGVISNAVDAANYYEQTGEIN
HCCCCCCCEEEEEEEEEECHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA