| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871507
Identifier: 116871507
GI number: 116871507
Start: 90345
End: 90734
Strand: Direct
Name: 116871507
Synonym: lwe0085
Alternate gene names: NA
Gene position: 90345-90734 (Clockwise)
Preceding gene: 116871506
Following gene: 116871508
Centisome position: 3.21
GC content: 35.9
Gene sequence:
>390_bases TTGGTTCAATCGATTAATACAAAGGTAGACTTAACAATAGATGCCACTGCGTATACTGGACTTACAGATTACGGTAAAAT TATGATTGGCGATAAAGGTTTTGAATTTTTCAACTCACGTGATGTGCGTAAATTCGTCCAAATTCCTTGGGAAGAAGTAG ATCAAGTTATAGTATCAGTTATGCTAAAAGGCAAGTGGATTCCTCGCTATGCCATCAAAACAAAGCGCAACGGTACCTAT ACATTTGCTTCTAAAAAGCCTAAAGATGTTTTACGTAAGATAAGAGTTTATGTCGACCCAGCTAATATGGTGAGTTCGCT AAGTTTCTTTGATGTTATGAAGCGCTCGTTTCGGTCGATTTTTAGCAAGAAGAAAAACAAAAATAAATAA
Upstream 100 bases:
>100_bases GGCAAAATTCACCTAGTCTCTTTTCGTTTAGATATATGACACAGATAACCGAATACGGTATAATAAACAAAACAAGCGAA AAGAAATGGAGCGAATACAG
Downstream 100 bases:
>100_bases GTCGATTTATACCGAAAAGTTTCAATGGATGTCTGTCTGTTGGAGCTTTTTTCATACATAATAATTGAACAAACGATGCA ATTTGATACAATAGAAAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MVQSINTKVDLTIDATAYTGLTDYGKIMIGDKGFEFFNSRDVRKFVQIPWEEVDQVIVSVMLKGKWIPRYAIKTKRNGTY TFASKKPKDVLRKIRVYVDPANMVSSLSFFDVMKRSFRSIFSKKKNKNK
Sequences:
>Translated_129_residues MVQSINTKVDLTIDATAYTGLTDYGKIMIGDKGFEFFNSRDVRKFVQIPWEEVDQVIVSVMLKGKWIPRYAIKTKRNGTY TFASKKPKDVLRKIRVYVDPANMVSSLSFFDVMKRSFRSIFSKKKNKNK >Mature_129_residues MVQSINTKVDLTIDATAYTGLTDYGKIMIGDKGFEFFNSRDVRKFVQIPWEEVDQVIVSVMLKGKWIPRYAIKTKRNGTY TFASKKPKDVLRKIRVYVDPANMVSSLSFFDVMKRSFRSIFSKKKNKNK
Specific function: Unknown
COG id: COG4687
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14988; Mature: 14988
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQSINTKVDLTIDATAYTGLTDYGKIMIGDKGFEFFNSRDVRKFVQIPWEEVDQVIVSV CCCCCCCEEEEEEECCEECCCCCCCEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH MLKGKWIPRYAIKTKRNGTYTFASKKPKDVLRKIRVYVDPANMVSSLSFFDVMKRSFRSI HHCCCCCCHHHEEECCCCEEEECCCCHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHH FSKKKNKNK HHHHCCCCC >Mature Secondary Structure MVQSINTKVDLTIDATAYTGLTDYGKIMIGDKGFEFFNSRDVRKFVQIPWEEVDQVIVSV CCCCCCCEEEEEEECCEECCCCCCCEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH MLKGKWIPRYAIKTKRNGTYTFASKKPKDVLRKIRVYVDPANMVSSLSFFDVMKRSFRSI HHCCCCCCHHHEEECCCCEEEECCCCHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHH FSKKKNKNK HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA