Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116871508

Identifier: 116871508

GI number: 116871508

Start: 90867

End: 91217

Strand: Direct

Name: 116871508

Synonym: lwe0086

Alternate gene names: NA

Gene position: 90867-91217 (Clockwise)

Preceding gene: 116871507

Following gene: 116871511

Centisome position: 3.23

GC content: 32.76

Gene sequence:

>351_bases
ATGAAAAAACCAAGAATTTACACAATGTCTTTCGCTAGTGTATACCCTCTGTACATCCAAAAAGTGGAGAAAAAAGGGCG
CATAAAAGAAGAAGTAGACGAAATTATTTTCTGGTTAACAGGTTATAATGAAGATTCCTTACAACAAGTCATAGATAAAG
AAATTGATTTTGAAACATTTTTCGAACAAGCTCCAAAAATGAATCCTAATGCGTCACTCATTACCGGAGTGATTTGCGGC
TACCGAGTGGAAGAAATTGAAGATAAACTTATGCAACAAATACGTTATCTAGATAAATTAATTGATGAACTTGCTAAGGG
GAAAAAGATGGAGAAAATATTAAGGAAATAA

Upstream 100 bases:

>100_bases
CTGTCTGTTGGAGCTTTTTTCATACATAATAATTGAACAAACGATGCAATTTGATACAATAGAAAGTGAAATCGCAAGTA
AATGAAGGAGGAACAGCAAC

Downstream 100 bases:

>100_bases
GTGAAAAAGCCTCCCGAGAAATCAGGTGGCTTTTTTCATAAATTATTTTTTAGTGATTTTATGTTTAGCCATTGCTAGTG
AATTTGCGACTTTTAAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MKKPRIYTMSFASVYPLYIQKVEKKGRIKEEVDEIIFWLTGYNEDSLQQVIDKEIDFETFFEQAPKMNPNASLITGVICG
YRVEEIEDKLMQQIRYLDKLIDELAKGKKMEKILRK

Sequences:

>Translated_116_residues
MKKPRIYTMSFASVYPLYIQKVEKKGRIKEEVDEIIFWLTGYNEDSLQQVIDKEIDFETFFEQAPKMNPNASLITGVICG
YRVEEIEDKLMQQIRYLDKLIDELAKGKKMEKILRK
>Mature_116_residues
MKKPRIYTMSFASVYPLYIQKVEKKGRIKEEVDEIIFWLTGYNEDSLQQVIDKEIDFETFFEQAPKMNPNASLITGVICG
YRVEEIEDKLMQQIRYLDKLIDELAKGKKMEKILRK

Specific function: Unknown

COG id: COG4898

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13772; Mature: 13772

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPRIYTMSFASVYPLYIQKVEKKGRIKEEVDEIIFWLTGYNEDSLQQVIDKEIDFETF
CCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH
FEQAPKMNPNASLITGVICGYRVEEIEDKLMQQIRYLDKLIDELAKGKKMEKILRK
HHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure
MKKPRIYTMSFASVYPLYIQKVEKKGRIKEEVDEIIFWLTGYNEDSLQQVIDKEIDFETF
CCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH
FEQAPKMNPNASLITGVICGYRVEEIEDKLMQQIRYLDKLIDELAKGKKMEKILRK
HHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA