| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871500
Identifier: 116871500
GI number: 116871500
Start: 77604
End: 78125
Strand: Direct
Name: 116871500
Synonym: lwe0078
Alternate gene names: NA
Gene position: 77604-78125 (Clockwise)
Preceding gene: 116871499
Following gene: 116871502
Centisome position: 2.76
GC content: 29.5
Gene sequence:
>522_bases GTGTGGGAATTCTTGCAAACTGTTTTTATTAGTATTGTTACAAGTGCAATAGTGAGTTTTATAGGTGCATGGATTGCTTT TTTTGTTGAAAGAAAAAAACAATTTTTCGCATTGCAAATAAAGGCTCGTGGAGAAATGACTGAGGATTGGAAGATGGCTC ATCTAGAGTTATATAAAAATGTTTTAGAATTTAAAAATTATATCGGTCTATTTACTGAAGAGGGTAATGAGTTTAAGAAA TCTGAAGATATACAAAACTTCGCTCCTTTGGAAAAATTGAATTCTTTGTACAACTTGATTAATGACAATTCCATTTTCTT TTCGACAGATTTGATTGCAAGTATAGAAACTTTTTTTAATAATAATAATCTTGCTAGTATTGCTTCGGCATACACTGGTA AGAATATGAACGATATACCATTTCCTATTAAATTATTGGATGATTCAATATTTGAATGCAATAAATTGATGAGTAAGATT AAAGCTGAGACAGGTATCTCTCTAATTAGCTTTAAGAAGTAA
Upstream 100 bases:
>100_bases GGATAGTAGTCATATCTTTTTAAAGAGTCTAGATATATAATAATGTCATATGAGTAGGGTAGTAGTAAATAAAGGTTAAC TTTCATAAAAATGAATTGGA
Downstream 100 bases:
>100_bases AGTTTTTAATATTTTAGAAAAAGAGTATTTGGTGAAATTATTGTGAGTTAATTGGGCAATTACTTTAAACAACGATATGA ATATTGAATCTTAAAAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MWEFLQTVFISIVTSAIVSFIGAWIAFFVERKKQFFALQIKARGEMTEDWKMAHLELYKNVLEFKNYIGLFTEEGNEFKK SEDIQNFAPLEKLNSLYNLINDNSIFFSTDLIASIETFFNNNNLASIASAYTGKNMNDIPFPIKLLDDSIFECNKLMSKI KAETGISLISFKK
Sequences:
>Translated_173_residues MWEFLQTVFISIVTSAIVSFIGAWIAFFVERKKQFFALQIKARGEMTEDWKMAHLELYKNVLEFKNYIGLFTEEGNEFKK SEDIQNFAPLEKLNSLYNLINDNSIFFSTDLIASIETFFNNNNLASIASAYTGKNMNDIPFPIKLLDDSIFECNKLMSKI KAETGISLISFKK >Mature_173_residues MWEFLQTVFISIVTSAIVSFIGAWIAFFVERKKQFFALQIKARGEMTEDWKMAHLELYKNVLEFKNYIGLFTEEGNEFKK SEDIQNFAPLEKLNSLYNLINDNSIFFSTDLIASIETFFNNNNLASIASAYTGKNMNDIPFPIKLLDDSIFECNKLMSKI KAETGISLISFKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19946; Mature: 19946
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWEFLQTVFISIVTSAIVSFIGAWIAFFVERKKQFFALQIKARGEMTEDWKMAHLELYKN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHH VLEFKNYIGLFTEEGNEFKKSEDIQNFAPLEKLNSLYNLINDNSIFFSTDLIASIETFFN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHC NNNLASIASAYTGKNMNDIPFPIKLLDDSIFECNKLMSKIKAETGISLISFKK CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC >Mature Secondary Structure MWEFLQTVFISIVTSAIVSFIGAWIAFFVERKKQFFALQIKARGEMTEDWKMAHLELYKN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHH VLEFKNYIGLFTEEGNEFKKSEDIQNFAPLEKLNSLYNLINDNSIFFSTDLIASIETFFN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHC NNNLASIASAYTGKNMNDIPFPIKLLDDSIFECNKLMSKIKAETGISLISFKK CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA