Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

Click here to switch to the map view.

The map label for this gene is 116871499

Identifier: 116871499

GI number: 116871499

Start: 76861

End: 77388

Strand: Direct

Name: 116871499

Synonym: lwe0077

Alternate gene names: NA

Gene position: 76861-77388 (Clockwise)

Preceding gene: 116871498

Following gene: 116871500

Centisome position: 2.73

GC content: 21.59

Gene sequence:

>528_bases
ATGGGCGATTCAATTGAAAATATATTGATATTGAGTGCAACAATATTAGGTATTAGCTATACAATTATTCAAGTTTATAC
CTTAGTAATAAGCGTCACTCCAAAAATGGAAGTGTTTATTACCGCGGAAAATAAAAGTAAACTTAGATTGAGTAAATTAA
TAATTTATTTATTATCATTTTTAGGAATATTATTTTATGCTAGTGAATATAATAGTGTTAGCAGTAATGTAGAAAAAAAT
GTGTATTTTATTTTTTTACTCTATTTTATAGTTTTTATAATTATTTATTCGGTTGCTCTTTTAATTAAATTTAAATACAA
TGCATATTATATTTTAAATGGCAGGTTATTTAAATTAAATTTAATTGAAGATGATTTAGTTTTTCTTGTTTCAATGGATT
CAAATCAGGAATTGAATATACAAAAAAAAGAAATTTTATTCACAAATAAACATGTTATTCTTAACAAACAAGAATTTAAA
AAATATAAGATAAAGCATATGTATTTGTTTGAAGATAAGGAACTCTAG

Upstream 100 bases:

>100_bases
AATTAAAATTGTACTTTCGTAAAAGAAATGAGGATATACTAAAAATGATAAACAATAGAAGATAAAAAAAACTTAAATAT
AGATACACAAGGAGAATGAT

Downstream 100 bases:

>100_bases
ATTTTACTTTTTATTGCCATTAGTAACAGTCCAAATTTCACATCAGAATTATCATGCTAGCAAGATCTATACAATCCTTA
ATAGTCAAAATATGATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MGDSIENILILSATILGISYTIIQVYTLVISVTPKMEVFITAENKSKLRLSKLIIYLLSFLGILFYASEYNSVSSNVEKN
VYFIFLLYFIVFIIIYSVALLIKFKYNAYYILNGRLFKLNLIEDDLVFLVSMDSNQELNIQKKEILFTNKHVILNKQEFK
KYKIKHMYLFEDKEL

Sequences:

>Translated_175_residues
MGDSIENILILSATILGISYTIIQVYTLVISVTPKMEVFITAENKSKLRLSKLIIYLLSFLGILFYASEYNSVSSNVEKN
VYFIFLLYFIVFIIIYSVALLIKFKYNAYYILNGRLFKLNLIEDDLVFLVSMDSNQELNIQKKEILFTNKHVILNKQEFK
KYKIKHMYLFEDKEL
>Mature_174_residues
GDSIENILILSATILGISYTIIQVYTLVISVTPKMEVFITAENKSKLRLSKLIIYLLSFLGILFYASEYNSVSSNVEKNV
YFIFLLYFIVFIIIYSVALLIKFKYNAYYILNGRLFKLNLIEDDLVFLVSMDSNQELNIQKKEILFTNKHVILNKQEFKK
YKIKHMYLFEDKEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20575; Mature: 20444

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDSIENILILSATILGISYTIIQVYTLVISVTPKMEVFITAENKSKLRLSKLIIYLLSF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCHHHHHHHHHHHHHH
LGILFYASEYNSVSSNVEKNVYFIFLLYFIVFIIIYSVALLIKFKYNAYYILNGRLFKLN
HHHHHHHHCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEECCEEEEEE
LIEDDLVFLVSMDSNQELNIQKKEILFTNKHVILNKQEFKKYKIKHMYLFEDKEL
EECCCEEEEEEECCCCCCCCCHHEEEEECCEEEEEHHHHHHEEEEEEEEEECCCC
>Mature Secondary Structure 
GDSIENILILSATILGISYTIIQVYTLVISVTPKMEVFITAENKSKLRLSKLIIYLLSF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCHHHHHHHHHHHHHH
LGILFYASEYNSVSSNVEKNVYFIFLLYFIVFIIIYSVALLIKFKYNAYYILNGRLFKLN
HHHHHHHHCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEECCEEEEEE
LIEDDLVFLVSMDSNQELNIQKKEILFTNKHVILNKQEFKKYKIKHMYLFEDKEL
EECCCEEEEEEECCCCCCCCCHHEEEEECCEEEEEHHHHHHEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA