| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871495
Identifier: 116871495
GI number: 116871495
Start: 71754
End: 72623
Strand: Direct
Name: 116871495
Synonym: lwe0073
Alternate gene names: NA
Gene position: 71754-72623 (Clockwise)
Preceding gene: 116871494
Following gene: 116871496
Centisome position: 2.55
GC content: 35.06
Gene sequence:
>870_bases ATGAAGAAAAAAATCATTGGTTTATTGGCGAGTTTATTATTATTAGGAGGATGTTTCAATTTAAACGAGAAAACCGAACA AGAAAAAGCGCAAGAAGTCACGACGCCTGTGCAGGATTATGTGGGGCAAGGATATTCATTTGTGGACGGGAATAAATCGG CAGAACGAGTGAAACAGCATGAGAAAGAGATTAAACAAGTAGCGATAGATTACATGAAAAGAAAATATAAAACAGTCGTA GAAGTTACTAATGTAGTGCCTGCGCGCAATGCGGCAGTTGTTATCGTAAAATGCAATGAACCAATTCAATTTACAACATC TGTTACGGTGGGATTTATTTTAAACAAGGATGAAGTAGGGTTTCCTAAAGAAGAGGAAGGCGAAATTGAGCAAGCTGTAT TAGGTGGCTTGTATGCGAAGGCATATGAGGCAGAATTTAAACAATTAAATGATGTTGCAGGAAAATTAGCCAAAAAATAT GATTTGGTAGGAATGACGGATGAAGCGTTAGTAAAATCATCTCCCTATGGAAATCAAGGAAATCACTATTTTATTGCACT ATCATATCGAGAGTACTCTAGTGTATATAATGCGTATATAGAAAACCCTCAAATTTCAGCAGAGGAATTACGAATTCTAT TCACAAAAGATGATCCTACCAGCGGAAATTTAACCATAGTAATGAAATTCTTCTCAAAAGAAGATAAATTACCTAAACAA GAAGTGGTAGATAATTTAGCAAAAGATTTCCAGCAAGAATTAGGATTACCAAAAGGAAACTATCCATTTGTAATATATAA GAACCTTATAATAAACAGGGTAGGGCTTCCAGATGGAGAGAATATAGAGGCAGAAATATCAGTTAAATGA
Upstream 100 bases:
>100_bases ATAAGATAGCTCCTCAAGAACTGTATCTACTATTAGAAGGAAGTGCAGAAAAGTTTAAGATACCAAAAAGAATAAAATAC AAAAGCAAACAGGAGAAGAG
Downstream 100 bases:
>100_bases GAAGGAGTTAATCAAAGATGACAACAAATTTAAAAACACCTGATACTGATTTAATTGAGAAATGGGTATATAAACACCTG AAAAAATTGAAAACTATATG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MKKKIIGLLASLLLLGGCFNLNEKTEQEKAQEVTTPVQDYVGQGYSFVDGNKSAERVKQHEKEIKQVAIDYMKRKYKTVV EVTNVVPARNAAVVIVKCNEPIQFTTSVTVGFILNKDEVGFPKEEEGEIEQAVLGGLYAKAYEAEFKQLNDVAGKLAKKY DLVGMTDEALVKSSPYGNQGNHYFIALSYREYSSVYNAYIENPQISAEELRILFTKDDPTSGNLTIVMKFFSKEDKLPKQ EVVDNLAKDFQQELGLPKGNYPFVIYKNLIINRVGLPDGENIEAEISVK
Sequences:
>Translated_289_residues MKKKIIGLLASLLLLGGCFNLNEKTEQEKAQEVTTPVQDYVGQGYSFVDGNKSAERVKQHEKEIKQVAIDYMKRKYKTVV EVTNVVPARNAAVVIVKCNEPIQFTTSVTVGFILNKDEVGFPKEEEGEIEQAVLGGLYAKAYEAEFKQLNDVAGKLAKKY DLVGMTDEALVKSSPYGNQGNHYFIALSYREYSSVYNAYIENPQISAEELRILFTKDDPTSGNLTIVMKFFSKEDKLPKQ EVVDNLAKDFQQELGLPKGNYPFVIYKNLIINRVGLPDGENIEAEISVK >Mature_289_residues MKKKIIGLLASLLLLGGCFNLNEKTEQEKAQEVTTPVQDYVGQGYSFVDGNKSAERVKQHEKEIKQVAIDYMKRKYKTVV EVTNVVPARNAAVVIVKCNEPIQFTTSVTVGFILNKDEVGFPKEEEGEIEQAVLGGLYAKAYEAEFKQLNDVAGKLAKKY DLVGMTDEALVKSSPYGNQGNHYFIALSYREYSSVYNAYIENPQISAEELRILFTKDDPTSGNLTIVMKFFSKEDKLPKQ EVVDNLAKDFQQELGLPKGNYPFVIYKNLIINRVGLPDGENIEAEISVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32412; Mature: 32412
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKIIGLLASLLLLGGCFNLNEKTEQEKAQEVTTPVQDYVGQGYSFVDGNKSAERVKQH CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCEEECCCCHHHHHHHH EKEIKQVAIDYMKRKYKTVVEVTNVVPARNAAVVIVKCNEPIQFTTSVTVGFILNKDEVG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEEEEEECCCCCC FPKEEEGEIEQAVLGGLYAKAYEAEFKQLNDVAGKLAKKYDLVGMTDEALVKSSPYGNQG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCC NHYFIALSYREYSSVYNAYIENPQISAEELRILFTKDDPTSGNLTIVMKFFSKEDKLPKQ CEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCHH EVVDNLAKDFQQELGLPKGNYPFVIYKNLIINRVGLPDGENIEAEISVK HHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCCCCCCEEEEEC >Mature Secondary Structure MKKKIIGLLASLLLLGGCFNLNEKTEQEKAQEVTTPVQDYVGQGYSFVDGNKSAERVKQH CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCEEECCCCHHHHHHHH EKEIKQVAIDYMKRKYKTVVEVTNVVPARNAAVVIVKCNEPIQFTTSVTVGFILNKDEVG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEEEEEECCCCCC FPKEEEGEIEQAVLGGLYAKAYEAEFKQLNDVAGKLAKKYDLVGMTDEALVKSSPYGNQG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCC NHYFIALSYREYSSVYNAYIENPQISAEELRILFTKDDPTSGNLTIVMKFFSKEDKLPKQ CEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCHH EVVDNLAKDFQQELGLPKGNYPFVIYKNLIINRVGLPDGENIEAEISVK HHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA