| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871496
Identifier: 116871496
GI number: 116871496
Start: 73104
End: 74003
Strand: Direct
Name: 116871496
Synonym: lwe0074
Alternate gene names: NA
Gene position: 73104-74003 (Clockwise)
Preceding gene: 116871495
Following gene: 116871498
Centisome position: 2.6
GC content: 32.44
Gene sequence:
>900_bases TTGAAAGCAACTCAAATACTAGAATATGATTATGATGGAGGAAATGACAACATGAAAAAGATAAAAATGGGATTACTAAG CGTCTTTGCACTATTAGTTCTTAGTGGGTGTTCCCAAGAGGCAAGCACTACTTTTTATTTGAATGATGAAGTTTTGACGG GGGATTTAAATAAGGAGAAGGTTATTGCGGCAGCTACGAAATTCGAGATGACTTGTACAGTAATGACCAACCAAATGAAT TTGCAAGATGAGGAAACGGTTAGAGTGATATCTACAAAAGAAACAAAGAGCATTTTAGATAGATGGAAAGAAAAAGCGGC TACGGTTAATACACTGGAAACTCCAGAAAATAAAAATTTTGTGATGTTATATGATTATTACCTTAAAAATAGCGAGAAAG TTTCTACTAAAGATTGGGATTATATTTTTGCAGAAGAAACGCCAGAAAATAATACAGACTTATTGGTGGAAAATGGCGAG TTATTTAAAGATAAGAATGGAAAATTAGATCTGATGATGGTGCATATCAATGGATTACTGGCAAAACCGACTGAATTAAC GCAAGAAATAAATAGAATTGAATCGTATATCAAGAAAGAAACAATAGAAAATAAAACGCAAAAGGCCCGTCTCTCTACCT ATTGTAACTTACTTTTACAAGTACAAAGTGAGAAGGAATTAGCTCGAGGTTTTAATAAATGGGGAAATTTTGCAGTAAAT TCAATAGAATATGCGAATGATGCCACAGCAGAATTAAAGGTTTCTTGTCGATATATGACAGAGGACGAATTTGAGAAATA TTATAATACTTATGTTAATCCAAATACAGGAAATAAAACAAGATTAGCCGAAGAGTATTTGGATAATAAATTTACTGTAA GTGATGAAAAAGTATCGTAA
Upstream 100 bases:
>100_bases TCACAATGAATAAAAAATGAAGATGGCATTACTATCTGTTCAAATTCGCAATTTGTACGGGTAAATCATTGAGTCGGAGG GAACGGGACAACAAGAATAT
Downstream 100 bases:
>100_bases TAATAGAAAAGATGGCTCCGAAGTAACTTGGAACCATCTTTTTTCAATTATTTCACTCGTATTCCAAATAATGGCATTAA AGCAGGAGCATGAGAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MKATQILEYDYDGGNDNMKKIKMGLLSVFALLVLSGCSQEASTTFYLNDEVLTGDLNKEKVIAAATKFEMTCTVMTNQMN LQDEETVRVISTKETKSILDRWKEKAATVNTLETPENKNFVMLYDYYLKNSEKVSTKDWDYIFAEETPENNTDLLVENGE LFKDKNGKLDLMMVHINGLLAKPTELTQEINRIESYIKKETIENKTQKARLSTYCNLLLQVQSEKELARGFNKWGNFAVN SIEYANDATAELKVSCRYMTEDEFEKYYNTYVNPNTGNKTRLAEEYLDNKFTVSDEKVS
Sequences:
>Translated_299_residues MKATQILEYDYDGGNDNMKKIKMGLLSVFALLVLSGCSQEASTTFYLNDEVLTGDLNKEKVIAAATKFEMTCTVMTNQMN LQDEETVRVISTKETKSILDRWKEKAATVNTLETPENKNFVMLYDYYLKNSEKVSTKDWDYIFAEETPENNTDLLVENGE LFKDKNGKLDLMMVHINGLLAKPTELTQEINRIESYIKKETIENKTQKARLSTYCNLLLQVQSEKELARGFNKWGNFAVN SIEYANDATAELKVSCRYMTEDEFEKYYNTYVNPNTGNKTRLAEEYLDNKFTVSDEKVS >Mature_299_residues MKATQILEYDYDGGNDNMKKIKMGLLSVFALLVLSGCSQEASTTFYLNDEVLTGDLNKEKVIAAATKFEMTCTVMTNQMN LQDEETVRVISTKETKSILDRWKEKAATVNTLETPENKNFVMLYDYYLKNSEKVSTKDWDYIFAEETPENNTDLLVENGE LFKDKNGKLDLMMVHINGLLAKPTELTQEINRIESYIKKETIENKTQKARLSTYCNLLLQVQSEKELARGFNKWGNFAVN SIEYANDATAELKVSCRYMTEDEFEKYYNTYVNPNTGNKTRLAEEYLDNKFTVSDEKVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34389; Mature: 34389
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATQILEYDYDGGNDNMKKIKMGLLSVFALLVLSGCSQEASTTFYLNDEVLTGDLNKEK CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCCCCCE VIAAATKFEMTCTVMTNQMNLQDEETVRVISTKETKSILDRWKEKAATVNTLETPENKNF EEEEEEEEEEEEEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCEEECCCCCCCCE VMLYDYYLKNSEKVSTKDWDYIFAEETPENNTDLLVENGELFKDKNGKLDLMMVHINGLL EEEEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEEECCCEEECCCCCEEEEEEEECCCC AKPTELTQEINRIESYIKKETIENKTQKARLSTYCNLLLQVQSEKELARGFNKWGNFAVN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCEEEC SIEYANDATAELKVSCRYMTEDEFEKYYNTYVNPNTGNKTRLAEEYLDNKFTVSDEKVS EEECCCCCCEEEEEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEECCCCCCC >Mature Secondary Structure MKATQILEYDYDGGNDNMKKIKMGLLSVFALLVLSGCSQEASTTFYLNDEVLTGDLNKEK CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCCCCCE VIAAATKFEMTCTVMTNQMNLQDEETVRVISTKETKSILDRWKEKAATVNTLETPENKNF EEEEEEEEEEEEEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCEEECCCCCCCCE VMLYDYYLKNSEKVSTKDWDYIFAEETPENNTDLLVENGELFKDKNGKLDLMMVHINGLL EEEEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEEECCCEEECCCCCEEEEEEEECCCC AKPTELTQEINRIESYIKKETIENKTQKARLSTYCNLLLQVQSEKELARGFNKWGNFAVN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCEEEC SIEYANDATAELKVSCRYMTEDEFEKYYNTYVNPNTGNKTRLAEEYLDNKFTVSDEKVS EEECCCCCCEEEEEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA