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The map label for this gene is yybT [H]

Identifier: 116871465

GI number: 116871465

Start: 41055

End: 43028

Strand: Direct

Name: yybT [H]

Synonym: lwe0043

Alternate gene names: 116871465

Gene position: 41055-43028 (Clockwise)

Preceding gene: 116871464

Following gene: 116871466

Centisome position: 1.46

GC content: 39.51

Gene sequence:

>1974_bases
ATGTCAGGCTATTTTCAAAAACGAATGCTTAAATATCCATTATACGGTCTGATTGCAGCGACAATTATATTGAGCGTAAT
CACGTTCTTTTTTTCGTGGTGGTTATCGGCGCTAGTTGTTGTTGGTGGGATTATTCTTACTGTAGCGATGTTTTACTTTG
AACATCGTCTAAATGAGGATGTTCAATTATATGTTTCTAATTTAACATATCGGATTAAGCGTAGTGAGGAAGAAGCGCTT
GTTGAAATGCCGATGGGAATATTGCTGTATGATGAACATTATAGAATCGAATGGGTTAATCCGTTCATGTCTAAATACTT
TGATAAAACAGAACTAATTGGTGAATCTTTAGAAGAGGTAGGTCCTGAATTTCTGGATGTAATTACTGGAAATGATGAAA
AAGGAATTATGTCGATTGCTTGGCGTGAACATCGTTTTGATACGATTGTGAAGCGTAAGGAGCGCATTTTGTATCTATAC
GACCGGACAGAGTATTATGAACTAAATAAGAAATATCAAGCGAACAAATCAGTTTTTGCAGTTATTTTCTTAGATAATTA
CGATGAATGGGCGCAAGGTATGGATGATAGACGCCGTAGTGCACTAAATAATTTGGTGACATCAATGCTTACTAACTGGG
CACGTGAACATAGAATTTATTTGAAACGGATTTCGACAGATCGTTTTATGGCTTTTTTAACAGAAGAGATGTTGAAAAGG
TTGGAAGAAGAGAAGTTTCAAATTTTGGATCGAATTCGCGAGCGGACTTCAAAGCAAAATATTCCGCTGACGCTTAGTAT
CGGAATTGGTTATAAAGAAGAGGACTTGATTGCGCTTGCTGATTTGGCTCAGTCTAGTTTGGACCTTGCTTTAGGGCGTG
GTGGAGATCAGGTCGTAATTAAGCAACCTGAAGGAAAAGTAAGATTTTATGGTGGAAAAACGAATCCAATGGAAAAAAGG
ACTCGTGTGCGTGCGCGTGTTATTTCGCAAGCTTTGCAAGAGCTAATCACACAGAGTGATCAAGTTTTTGTTATGGGGCA
TCGCTATCCGGATATGGACGTAATTGGTTCTAGTCTTGGAGTTATGCGAATTGCAGAGATGAACGATCGAAATGCTTATG
TGGTCGTTGAACCTGGCAAAATGAGTCCAGATGTGAAACGATTAATGAATGAAATTGAAGAATACCCTAATGTGATTAAA
AATATTGTGACTCCACAAGTTGCACTCGAAAATATCACAGAGAAGAGTTTGCTTGTTGTTGTTGATACACACAAACCTTC
AATGGTTATTAATAAGGAACTGCTCGATTCGGCTACAAATGTCGTTGTTGTCGATCATCACCGTCGTTCAGAGGAATTTG
TTGGTAATCCGGTTCTAGTTTATATTGAACCGTATGCGTCCTCTACGGCCGAACTGATTACGGAGCTATTTGAGTACCAA
CCTGATTTAGAACAAGTTGGGAAAATTGAAGCAACGGCACTTCTTTCCGGGATTGTCGTTGATACTAAAAACTTTACATT
ACGGACTGGGTCGAGAACGTTTGATGCAGCAAGTTATCTACGTTCGCTTGGGGCGGATACGATTTTAGTACAGCAATTTT
TGAAAGAAGATATTACTACTTTTACACAGCGAAGTCGTTTAGTGGAGTCGCTTGAAATTTATCATGATGGTATGGCGATT
GCTGCTGGACAGGAAGACGAGGAATTTGGAACGGTCATTGCAGCGCAGGCAGCAGATACGATGCTTTCTATGGAAGGTGT
ACAGGCGTCCTTTGTTATCACGCTTCGTCCAGATAAATTAATCGGAATTAGCGCAAGGTCGCTTGGACAAATCAATGTGC
AAGTCATTATGGAAAAACTAGGCGGTGGAGGTCATTTATCGAATGCAGCCACACAGCTTAAAGATGTTACAATTGCAGAA
GCAAAAAAACAATTAATTAGCGCCATTGATGCGTATTGGAAGGGAGAAACATAA

Upstream 100 bases:

>100_bases
AGGTAAAATAATAGTGGTGAATTGTTAGTTAAGTTTATGTTATGATATAGATACTCAAATTCAGACAAAAGGTATGTAAA
AAAATGGGGAGCTGGATGAA

Downstream 100 bases:

>100_bases
TTATGAAAGTTATTTTCTTGAAAGACGTAAAAGGTAAAGGTAAAAAAGGGGAAACAAAAAATGTTGCAGATGGTTATGCA
AACAATTTTTTAATTAAAAA

Product: DHH subfamily 1 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 656

Protein sequence:

>657_residues
MSGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEHRLNEDVQLYVSNLTYRIKRSEEEAL
VEMPMGILLYDEHYRIEWVNPFMSKYFDKTELIGESLEEVGPEFLDVITGNDEKGIMSIAWREHRFDTIVKRKERILYLY
DRTEYYELNKKYQANKSVFAVIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLKR
LEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEEDLIALADLAQSSLDLALGRGGDQVVIKQPEGKVRFYGGKTNPMEKR
TRVRARVISQALQELITQSDQVFVMGHRYPDMDVIGSSLGVMRIAEMNDRNAYVVVEPGKMSPDVKRLMNEIEEYPNVIK
NIVTPQVALENITEKSLLVVVDTHKPSMVINKELLDSATNVVVVDHHRRSEEFVGNPVLVYIEPYASSTAELITELFEYQ
PDLEQVGKIEATALLSGIVVDTKNFTLRTGSRTFDAASYLRSLGADTILVQQFLKEDITTFTQRSRLVESLEIYHDGMAI
AAGQEDEEFGTVIAAQAADTMLSMEGVQASFVITLRPDKLIGISARSLGQINVQVIMEKLGGGGHLSNAATQLKDVTIAE
AKKQLISAIDAYWKGET

Sequences:

>Translated_657_residues
MSGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEHRLNEDVQLYVSNLTYRIKRSEEEAL
VEMPMGILLYDEHYRIEWVNPFMSKYFDKTELIGESLEEVGPEFLDVITGNDEKGIMSIAWREHRFDTIVKRKERILYLY
DRTEYYELNKKYQANKSVFAVIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLKR
LEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEEDLIALADLAQSSLDLALGRGGDQVVIKQPEGKVRFYGGKTNPMEKR
TRVRARVISQALQELITQSDQVFVMGHRYPDMDVIGSSLGVMRIAEMNDRNAYVVVEPGKMSPDVKRLMNEIEEYPNVIK
NIVTPQVALENITEKSLLVVVDTHKPSMVINKELLDSATNVVVVDHHRRSEEFVGNPVLVYIEPYASSTAELITELFEYQ
PDLEQVGKIEATALLSGIVVDTKNFTLRTGSRTFDAASYLRSLGADTILVQQFLKEDITTFTQRSRLVESLEIYHDGMAI
AAGQEDEEFGTVIAAQAADTMLSMEGVQASFVITLRPDKLIGISARSLGQINVQVIMEKLGGGGHLSNAATQLKDVTIAE
AKKQLISAIDAYWKGET
>Mature_656_residues
SGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEHRLNEDVQLYVSNLTYRIKRSEEEALV
EMPMGILLYDEHYRIEWVNPFMSKYFDKTELIGESLEEVGPEFLDVITGNDEKGIMSIAWREHRFDTIVKRKERILYLYD
RTEYYELNKKYQANKSVFAVIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLKRL
EEEKFQILDRIRERTSKQNIPLTLSIGIGYKEEDLIALADLAQSSLDLALGRGGDQVVIKQPEGKVRFYGGKTNPMEKRT
RVRARVISQALQELITQSDQVFVMGHRYPDMDVIGSSLGVMRIAEMNDRNAYVVVEPGKMSPDVKRLMNEIEEYPNVIKN
IVTPQVALENITEKSLLVVVDTHKPSMVINKELLDSATNVVVVDHHRRSEEFVGNPVLVYIEPYASSTAELITELFEYQP
DLEQVGKIEATALLSGIVVDTKNFTLRTGSRTFDAASYLRSLGADTILVQQFLKEDITTFTQRSRLVESLEIYHDGMAIA
AGQEDEEFGTVIAAQAADTMLSMEGVQASFVITLRPDKLIGISARSLGQINVQVIMEKLGGGGHLSNAATQLKDVTIAEA
KKQLISAIDAYWKGET

Specific function: Unknown

COG id: COG3887

COG function: function code T; Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000160
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR014528 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 74868; Mature: 74737

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEHRLNED
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VQLYVSNLTYRIKRSEEEALVEMPMGILLYDEHYRIEWVNPFMSKYFDKTELIGESLEEV
CEEEEEHHEEEEECCHHHHHHHCCCCEEEECCCEEEEECCHHHHHHCCHHHHHHHHHHHH
GPEFLDVITGNDEKGIMSIAWREHRFDTIVKRKERILYLYDRTEYYELNKKYQANKSVFA
CHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCHHCCCCCEEE
VIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLKR
EEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEEDLIALADLAQSSLDLALGRGGDQVVI
HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEE
KQPEGKVRFYGGKTNPMEKRTRVRARVISQALQELITQSDQVFVMGHRYPDMDVIGSSLG
ECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCC
VMRIAEMNDRNAYVVVEPGKMSPDVKRLMNEIEEYPNVIKNIVTPQVALENITEKSLLVV
CEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEE
VDTHKPSMVINKELLDSATNVVVVDHHRRSEEFVGNPVLVYIEPYASSTAELITELFEYQ
EECCCCCCEECHHHHCCCCCEEEEECCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHCC
PDLEQVGKIEATALLSGIVVDTKNFTLRTGSRTFDAASYLRSLGADTILVQQFLKEDITT
CCHHHHCCHHHHHHHHHHEEECCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
FTQRSRLVESLEIYHDGMAIAAGQEDEEFGTVIAAQAADTMLSMEGVQASFVITLRPDKL
HHHHHHHHHHHHHHHCCEEEECCCCCHHHHHEEEHHHHHHHHHHCCCCEEEEEEECCCCE
IGISARSLGQINVQVIMEKLGGGGHLSNAATQLKDVTIAEAKKQLISAIDAYWKGET
EEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEHRLNED
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VQLYVSNLTYRIKRSEEEALVEMPMGILLYDEHYRIEWVNPFMSKYFDKTELIGESLEEV
CEEEEEHHEEEEECCHHHHHHHCCCCEEEECCCEEEEECCHHHHHHCCHHHHHHHHHHHH
GPEFLDVITGNDEKGIMSIAWREHRFDTIVKRKERILYLYDRTEYYELNKKYQANKSVFA
CHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCHHCCCCCEEE
VIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLKR
EEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEEDLIALADLAQSSLDLALGRGGDQVVI
HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEE
KQPEGKVRFYGGKTNPMEKRTRVRARVISQALQELITQSDQVFVMGHRYPDMDVIGSSLG
ECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCC
VMRIAEMNDRNAYVVVEPGKMSPDVKRLMNEIEEYPNVIKNIVTPQVALENITEKSLLVV
CEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEE
VDTHKPSMVINKELLDSATNVVVVDHHRRSEEFVGNPVLVYIEPYASSTAELITELFEYQ
EECCCCCCEECHHHHCCCCCEEEEECCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHCC
PDLEQVGKIEATALLSGIVVDTKNFTLRTGSRTFDAASYLRSLGADTILVQQFLKEDITT
CCHHHHCCHHHHHHHHHHEEECCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
FTQRSRLVESLEIYHDGMAIAAGQEDEEFGTVIAAQAADTMLSMEGVQASFVITLRPDKL
HHHHHHHHHHHHHHHCCEEEECCCCCHHHHHEEEHHHHHHHHHHCCCCEEEEEEECCCCE
IGISARSLGQINVQVIMEKLGGGGHLSNAATQLKDVTIAEAKKQLISAIDAYWKGET
EEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]