| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is flgA [H]
Identifier: 162227931
GI number: 162227931
Start: 3339022
End: 3339954
Strand: Direct
Name: flgA [H]
Synonym: Bcen2424_3026
Alternate gene names: 162227931
Gene position: 3339022-3339954 (Clockwise)
Preceding gene: 116691030
Following gene: 116691045
Centisome position: 95.84
GC content: 75.99
Gene sequence:
>933_bases ATGGTCGTGACGAGCGTTCCGCCGCCGGCCGCTGCGCCGGCTCCCGCAACGGTCCCCGTCTACGTAGCCGCCCGCGCGAA CGCCGGGTACGGCGCGACGCCGCGCGCGGCCGACCCGGCCGCGATCGCGATGGTCGTCGCCGGCACCGCCGAGCCTGCAT CGAATCCCGCGCGGCCGGCGCCGCAAGCGGCCGCAGCCGCCCGCCTGGCGGCGGCTCGTGCCGCATCAGCCGCAACGGCG CCGCGCACGGCGGCTGCTTCGGCCCGCCCGGCTCCGGCTACCGTCGCGTCCCAACCCGCGACGCCGCCCGGCCAGCAAGA CCCCGAAACGATCCGGCGCGCGGCGCTCGCGTTCCTGCAGCAGCAGATCGCCGGCCTGCCCGGCAAGACCACCGCGACGG TCACGACCGCCTTTCCGCGCGGGCTCGCGGCGTGCACGACGCTCGAACCGTTCCTGCCGACCGGCGCGCGCCTGTGGGGC CGCACGACGGTCGGCGTGCGCTGCGCGGGCGAGCGGCCGTGGACCGTCTACCTGCAGGCGAAGGTCGCCGTGCAGGCCAC CTATTACGTCGCCGCGCGCCAGATCGCGCCCGGCGAGCCGCTCTCCGCGGCCGACCTGGTCGCACGCGACGGCGACCTGA CGGTCATGCCGCTCGCGGTGATCACCGATCCGGCGCAGGCGATCGGCGCGACCGCGCTCGCGCGCATCTCGGCCGGGCTG CCGCTGCGGCAGGACATGCTGAAGAGCGCGGCGTCGGTGTCGGCCGGCCAGACGGTACGGGTCGTCGCGGCCGGCCCCGG CTTCACGATTTCGGCCGAAGGCAGCGTGCTCGCGAATGCGGCGCCGGGCCAGTCGGTACGGGTGCGGATGGCGGCCGGAC AGATCGTCACGGCGATCGTCAAGGACGCCGGCACCGTGGAAATTCCGCTGTAG
Upstream 100 bases:
>100_bases GCAGTTCGGCGGGAATGCGGGCGTCGCTTCGGCGTCGGACGCGCAACGCGCGGCCGGCGCGGCGACCGGCAGCGCCTACG CGGCGCAACCGGCCAGCCAG
Downstream 100 bases:
>100_bases GGCCGGATCTGCCGCAAGAATGTAAAGAATTGTTTATTCGGAGCATTTCGGGCTCGCGATGCTAAAGTTCGGGCCGACCC GGCCGTTATCTGGGTCAAAC
Product: flagellar basal body P-ring biosynthesis protein FlgA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MVVTSVPPPAAAPAPATVPVYVAARANAGYGATPRAADPAAIAMVVAGTAEPASNPARPAPQAAAAARLAAARAASAATA PRTAAASARPAPATVASQPATPPGQQDPETIRRAALAFLQQQIAGLPGKTTATVTTAFPRGLAACTTLEPFLPTGARLWG RTTVGVRCAGERPWTVYLQAKVAVQATYYVAARQIAPGEPLSAADLVARDGDLTVMPLAVITDPAQAIGATALARISAGL PLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSVLANAAPGQSVRVRMAAGQIVTAIVKDAGTVEIPL
Sequences:
>Translated_310_residues MVVTSVPPPAAAPAPATVPVYVAARANAGYGATPRAADPAAIAMVVAGTAEPASNPARPAPQAAAAARLAAARAASAATA PRTAAASARPAPATVASQPATPPGQQDPETIRRAALAFLQQQIAGLPGKTTATVTTAFPRGLAACTTLEPFLPTGARLWG RTTVGVRCAGERPWTVYLQAKVAVQATYYVAARQIAPGEPLSAADLVARDGDLTVMPLAVITDPAQAIGATALARISAGL PLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSVLANAAPGQSVRVRMAAGQIVTAIVKDAGTVEIPL >Mature_310_residues MVVTSVPPPAAAPAPATVPVYVAARANAGYGATPRAADPAAIAMVVAGTAEPASNPARPAPQAAAAARLAAARAASAATA PRTAAASARPAPATVASQPATPPGQQDPETIRRAALAFLQQQIAGLPGKTTATVTTAFPRGLAACTTLEPFLPTGARLWG RTTVGVRCAGERPWTVYLQAKVAVQATYYVAARQIAPGEPLSAADLVARDGDLTVMPLAVITDPAQAIGATALARISAGL PLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSVLANAAPGQSVRVRMAAGQIVTAIVKDAGTVEIPL
Specific function: Involved in the assembly process of the P-ring formation. It may associate with flgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly [H]
COG id: COG1261
COG function: function code NO; Flagellar basal body P-ring biosynthesis protein
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgA family [H]
Homologues:
Organism=Escherichia coli, GI1787312, Length=195, Percent_Identity=35.8974358974359, Blast_Score=99, Evalue=4e-22,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017585 - InterPro: IPR013974 [H]
Pfam domain/function: PF08666 SAF [H]
EC number: NA
Molecular weight: Translated: 30821; Mature: 30821
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVTSVPPPAAAPAPATVPVYVAARANAGYGATPRAADPAAIAMVVAGTAEPASNPARPA CEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC PQAAAAARLAAARAASAATAPRTAAASARPAPATVASQPATPPGQQDPETIRRAALAFLQ CHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH QQIAGLPGKTTATVTTAFPRGLAACTTLEPFLPTGARLWGRTTVGVRCAGERPWTVYLQA HHHHCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCHHCCCCEEEEEECCCCCEEEEEEE KVAVQATYYVAARQIAPGEPLSAADLVARDGDLTVMPLAVITDPAQAIGATALARISAGL EEEEEEEEEEEEHHCCCCCCCCHHHHEECCCCEEEEEEEEECCCHHHHHHHHHHHHHCCC PLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSVLANAAPGQSVRVRMAAGQIVTAIV CHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCEEEECCCCCCEEEEEEHHHHHHHHH KDAGTVEIPL HCCCEEEECC >Mature Secondary Structure MVVTSVPPPAAAPAPATVPVYVAARANAGYGATPRAADPAAIAMVVAGTAEPASNPARPA CEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC PQAAAAARLAAARAASAATAPRTAAASARPAPATVASQPATPPGQQDPETIRRAALAFLQ CHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH QQIAGLPGKTTATVTTAFPRGLAACTTLEPFLPTGARLWGRTTVGVRCAGERPWTVYLQA HHHHCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCHHCCCCEEEEEECCCCCEEEEEEE KVAVQATYYVAARQIAPGEPLSAADLVARDGDLTVMPLAVITDPAQAIGATALARISAGL EEEEEEEEEEEEHHCCCCCCCCHHHHEECCCCEEEEEEEEECCCHHHHHHHHHHHHHCCC PLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSVLANAAPGQSVRVRMAAGQIVTAIV CHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCEEEECCCCCCEEEEEEHHHHHHHHH KDAGTVEIPL HCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA