| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116691045
Identifier: 116691045
GI number: 116691045
Start: 3340072
End: 3340401
Strand: Direct
Name: 116691045
Synonym: Bcen2424_3027
Alternate gene names: NA
Gene position: 3340072-3340401 (Clockwise)
Preceding gene: 162227931
Following gene: 116691046
Centisome position: 95.87
GC content: 68.48
Gene sequence:
>330_bases GTGAAGATCGATTCCACTCCGAAACCGAGCCCCCTCGCGCCGACCGGCAACGGCGCGGCCCGTGCGCCGTCCGGCACGGC CCAGTCGTCCGCGCAGGCAGCCGATGCAGGATCGAGCGGCGGCGACACGACCGTGAACCTGTCGGGTCTGTCCGGCCAGC TGCGTTCGGTCTCCGCGTCGGGCGACGCCGATATCGACACGGGCCTGGTCCAGTCGATCAAGGACGCGCTGAACAACGGC ACGCTGACGATCGACGCGAACAAGATTGCCGACGGCGTATTGAACACCGCCCGCGAACTGCTGCAGCAGCAGCGCCCGCA GGGCAGCTAA
Upstream 100 bases:
>100_bases GAATGTAAAGAATTGTTTATTCGGAGCATTTCGGGCTCGCGATGCTAAAGTTCGGGCCGACCCGGCCGTTATCTGGGTCA AACCGTACAGGAAACCCATC
Downstream 100 bases:
>100_bases TCCCGGCCTCGTGGCCGGTTCACCCGGTTTGCCGGCGTGCGGCCATCCCGCGCACCGGCGTGACGAGCATGACGCGATGA GAGAAGAGCTGCTGGCCACG
Product: putative anti-sigma-28 factor, FlgM
Products: NA
Alternate protein names: Anti-Sigma-28 Factor FlgM Family Protein; Negative Regulator Of Flagellin Synthesis FlgM
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MKIDSTPKPSPLAPTGNGAARAPSGTAQSSAQAADAGSSGGDTTVNLSGLSGQLRSVSASGDADIDTGLVQSIKDALNNG TLTIDANKIADGVLNTARELLQQQRPQGS
Sequences:
>Translated_109_residues MKIDSTPKPSPLAPTGNGAARAPSGTAQSSAQAADAGSSGGDTTVNLSGLSGQLRSVSASGDADIDTGLVQSIKDALNNG TLTIDANKIADGVLNTARELLQQQRPQGS >Mature_109_residues MKIDSTPKPSPLAPTGNGAARAPSGTAQSSAQAADAGSSGGDTTVNLSGLSGQLRSVSASGDADIDTGLVQSIKDALNNG TLTIDANKIADGVLNTARELLQQQRPQGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10775; Mature: 10775
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDSTPKPSPLAPTGNGAARAPSGTAQSSAQAADAGSSGGDTTVNLSGLSGQLRSVSAS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCEECCCC GDADIDTGLVQSIKDALNNGTLTIDANKIADGVLNTARELLQQQRPQGS CCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKIDSTPKPSPLAPTGNGAARAPSGTAQSSAQAADAGSSGGDTTVNLSGLSGQLRSVSAS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCEECCCC GDADIDTGLVQSIKDALNNGTLTIDANKIADGVLNTARELLQQQRPQGS CCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA