| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116691166
Identifier: 116691166
GI number: 116691166
Start: 3468624
End: 3468941
Strand: Direct
Name: 116691166
Synonym: Bcen2424_3148
Alternate gene names: NA
Gene position: 3468624-3468941 (Clockwise)
Preceding gene: 116691164
Following gene: 116691171
Centisome position: 99.56
GC content: 68.24
Gene sequence:
>318_bases ATGAAGACGATGAAACACGCGGCATGCGCATTCGTGCTGATCGGCGCGGCGTTCGCCGCTCACGCGCAAGCCGCGTCGAC GCTCACGCGCGCACAGGTCCGCCAGGAACTCGTGGAGCTGCAGGCCGCCGGCTACCGGACGAGCCTCGCAAGCAGTCCCG ACTTTCCGCGGAACATGCAGGCGGTCATGCAGCGTGCCGCGCAGGCGCGCGGTGAAGACGACGTTGCCGGTTACGGCAGC GACGACCGGGCGACCGGGGAATCAGGCAAGCCGGCGCTGCCGCACGCAATCGACCGCGGCACTTATGCGCATCACTGA
Upstream 100 bases:
>100_bases CACGAGGATGTTTCGTTTGGCCTCCGAAGCCTAGACTGGCTGCATCGTTTCCGGCCGCGCCGGCGATGGCGCGGCACCGG AACCTCACGGAGCACACACG
Downstream 100 bases:
>100_bases CCGGCTCACCGATGGAACCAGCCGGATCGCACGGCAGCGGCGCGGCACACGCCGCGCCGGCCGCGTGCGCGATCGTCACA CGCTGAAGCGGTTCAGCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MKTMKHAACAFVLIGAAFAAHAQAASTLTRAQVRQELVELQAAGYRTSLASSPDFPRNMQAVMQRAAQARGEDDVAGYGS DDRATGESGKPALPHAIDRGTYAHH
Sequences:
>Translated_105_residues MKTMKHAACAFVLIGAAFAAHAQAASTLTRAQVRQELVELQAAGYRTSLASSPDFPRNMQAVMQRAAQARGEDDVAGYGS DDRATGESGKPALPHAIDRGTYAHH >Mature_105_residues MKTMKHAACAFVLIGAAFAAHAQAASTLTRAQVRQELVELQAAGYRTSLASSPDFPRNMQAVMQRAAQARGEDDVAGYGS DDRATGESGKPALPHAIDRGTYAHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11125; Mature: 11125
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTMKHAACAFVLIGAAFAAHAQAASTLTRAQVRQELVELQAAGYRTSLASSPDFPRNMQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHH AVMQRAAQARGEDDVAGYGSDDRATGESGKPALPHAIDRGTYAHH HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure MKTMKHAACAFVLIGAAFAAHAQAASTLTRAQVRQELVELQAAGYRTSLASSPDFPRNMQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHH AVMQRAAQARGEDDVAGYGSDDRATGESGKPALPHAIDRGTYAHH HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA