| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is phnA [H]
Identifier: 116691160
GI number: 116691160
Start: 3458949
End: 3460187
Strand: Reverse
Name: phnA [H]
Synonym: Bcen2424_3142
Alternate gene names: 116691160
Gene position: 3460187-3458949 (Counterclockwise)
Preceding gene: 116691162
Following gene: 116691159
Centisome position: 99.32
GC content: 67.39
Gene sequence:
>1239_bases ATGACTGAAACGCCTGTATCCGTGGAAGTGAACGGCCGCCGCTACAACTGGATGAGCCGGCCCGTGGTGGTCGTCTGCGT CGATGGCTGCGCATACGAATATCTGGAGGAAGCCGCCGAGGCCGGCGTCGCGCCGTTCCTGCGCACGCTGCTGAAGCCCG GCACGGCGCTCAAGGGCGAGTGCGTGGTGCCGAGTTTCACCAATCCGAACAACCTGTCGATCGTCACCGGCGTGCCGCCG GCGATCCACGGGATAAGCGGCAACTACTTCTACGATCGCGACACCGGCGCCGAGGTGCTGATGAACGATCCGAAGTACCT CGTCGCGCCCACCGTGCTCGCGACCTTCGCCGAGCAGGGTGCGCGCGTCGCGGTCGTCACCGCGAAGGACAAGCTGCGCC GCCTGCTCGGCAAGGGGCTCAAGGGCATCTGCTTCTCGTCGGAAAAGGCCGATGAAGCGAGCGTCGAGGAAAACGGCATC GACCACGTGCTCGAGCTGGTCGGCAAGCCGGTGCCGAGCGTGTACAGCGCGGACCTGTCGGAATTCGTGTTCGCGGCCGG CGTGCGCCTGCTCGAGACGCGCCCGATCGACCTGATGTACCTGTCGACGACCGACTACGTGCAGCACAAGTGCGCACCGG GCACGCCCGGCGCGAACGCGTTCTACGCGATGATGGACACCTACCTGCAGCGCCTCGACGCACTCGGCGCGATCGTCGCG ATCACCGCCGATCACGGGATGAACGCGAAGCACGACGACGCGACCGGCGAGCCGAACGTGATCTACCTGCAGGAGCTGTT CGACGAATGGCTCGGCCACGATGCGGCGCGTGTGATCCTGCCGATCACCGACCCGTACGTCGTGCACCACGGCGCGCTCG GTTCGTTCGCGACCGTCTACGTGCCTGGCGACGCCGACACCGACGCGCTGCGCGCGCGGCTCGCCGCGGTCGACGGCATC GAGGTCGTGCTGACGGGCGCCGAAGGCTGCGCGCGCTTCGAGCTGCCGCCCGCGCGGATGGGCGACCTGATCGTGATCTC GAAGCAGGACGTCGTGCTCGGCACGCGCCGCATCAAGCACGACCTGTCGGGCCTCGACGTGCCGCTGCGCTCGCACGGCG GGATCTCCGAGCAGATCGTGCCGCTGATCTTCAGCAAGCCGGTCGCGACCGACGTCACGGGCCGCGCGCGGCTGCGCAAC TTCGACATCATCGACATCGCGCTCAACCATCTGCAGTGA
Upstream 100 bases:
>100_bases CTACAAATCATCGACTTTAATGTCAAGCGTCGAAAACAGCAGTGGCCACGGCGCGGGCGCCGACCGCTCAACCCCCTTCG AACCGAAAAGAATGAACGTC
Downstream 100 bases:
>100_bases CGCGGCCGCATCCGCCAGGAGACACTCATGAACGCCATTGCAGCATCGACGGATGTCCGCACGCCTCATCGTGAAGCACT GCGAATCGACGGTGAAAAGA
Product: phosphonoacetate hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MTETPVSVEVNGRRYNWMSRPVVVVCVDGCAYEYLEEAAEAGVAPFLRTLLKPGTALKGECVVPSFTNPNNLSIVTGVPP AIHGISGNYFYDRDTGAEVLMNDPKYLVAPTVLATFAEQGARVAVVTAKDKLRRLLGKGLKGICFSSEKADEASVEENGI DHVLELVGKPVPSVYSADLSEFVFAAGVRLLETRPIDLMYLSTTDYVQHKCAPGTPGANAFYAMMDTYLQRLDALGAIVA ITADHGMNAKHDDATGEPNVIYLQELFDEWLGHDAARVILPITDPYVVHHGALGSFATVYVPGDADTDALRARLAAVDGI EVVLTGAEGCARFELPPARMGDLIVISKQDVVLGTRRIKHDLSGLDVPLRSHGGISEQIVPLIFSKPVATDVTGRARLRN FDIIDIALNHLQ
Sequences:
>Translated_412_residues MTETPVSVEVNGRRYNWMSRPVVVVCVDGCAYEYLEEAAEAGVAPFLRTLLKPGTALKGECVVPSFTNPNNLSIVTGVPP AIHGISGNYFYDRDTGAEVLMNDPKYLVAPTVLATFAEQGARVAVVTAKDKLRRLLGKGLKGICFSSEKADEASVEENGI DHVLELVGKPVPSVYSADLSEFVFAAGVRLLETRPIDLMYLSTTDYVQHKCAPGTPGANAFYAMMDTYLQRLDALGAIVA ITADHGMNAKHDDATGEPNVIYLQELFDEWLGHDAARVILPITDPYVVHHGALGSFATVYVPGDADTDALRARLAAVDGI EVVLTGAEGCARFELPPARMGDLIVISKQDVVLGTRRIKHDLSGLDVPLRSHGGISEQIVPLIFSKPVATDVTGRARLRN FDIIDIALNHLQ >Mature_411_residues TETPVSVEVNGRRYNWMSRPVVVVCVDGCAYEYLEEAAEAGVAPFLRTLLKPGTALKGECVVPSFTNPNNLSIVTGVPPA IHGISGNYFYDRDTGAEVLMNDPKYLVAPTVLATFAEQGARVAVVTAKDKLRRLLGKGLKGICFSSEKADEASVEENGID HVLELVGKPVPSVYSADLSEFVFAAGVRLLETRPIDLMYLSTTDYVQHKCAPGTPGANAFYAMMDTYLQRLDALGAIVAI TADHGMNAKHDDATGEPNVIYLQELFDEWLGHDAARVILPITDPYVVHHGALGSFATVYVPGDADTDALRARLAAVDGIE VVLTGAEGCARFELPPARMGDLIVISKQDVVLGTRRIKHDLSGLDVPLRSHGGISEQIVPLIFSKPVATDVTGRARLRNF DIIDIALNHLQ
Specific function: Specifically hydrolyzes phosphonoacetate. Does not have activity on other organophosphonates or acetates [H]
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family. PhnA subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR002591 - InterPro: IPR012710 - InterPro: IPR023116 [H]
Pfam domain/function: PF01663 Phosphodiest [H]
EC number: =3.11.1.2 [H]
Molecular weight: Translated: 44453; Mature: 44322
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETPVSVEVNGRRYNWMSRPVVVVCVDGCAYEYLEEAAEAGVAPFLRTLLKPGTALKGE CCCCCEEEEECCEEEECCCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC CVVPSFTNPNNLSIVTGVPPAIHGISGNYFYDRDTGAEVLMNDPKYLVAPTVLATFAEQG EECCCCCCCCCEEEEECCCHHHCCCCCCEEEECCCCCEEEECCCCEEEHHHHHHHHHHCC ARVAVVTAKDKLRRLLGKGLKGICFSSEKADEASVEENGIDHVLELVGKPVPSVYSADLS CEEEEEECHHHHHHHHHCCCCEEEECCCCCCCCCHHHCCHHHHHHHHCCCCCCHHHHHHH EFVFAAGVRLLETRPIDLMYLSTTDYVQHKCAPGTPGANAFYAMMDTYLQRLDALGAIVA HHHHHHCCCEEECCCEEEEEEECCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEE ITADHGMNAKHDDATGEPNVIYLQELFDEWLGHDAARVILPITDPYVVHHGALGSFATVY EEECCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCEEEEE VPGDADTDALRARLAAVDGIEVVLTGAEGCARFELPPARMGDLIVISKQDVVLGTRRIKH ECCCCCHHHHHHHHHHCCCEEEEEECCCCCEECCCCCCCCCCEEEEECCCEEEHHHHHHH DLSGLDVPLRSHGGISEQIVPLIFSKPVATDVTGRARLRNFDIIDIALNHLQ HHCCCCCCHHCCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCEEEHHHHHCC >Mature Secondary Structure TETPVSVEVNGRRYNWMSRPVVVVCVDGCAYEYLEEAAEAGVAPFLRTLLKPGTALKGE CCCCEEEEECCEEEECCCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC CVVPSFTNPNNLSIVTGVPPAIHGISGNYFYDRDTGAEVLMNDPKYLVAPTVLATFAEQG EECCCCCCCCCEEEEECCCHHHCCCCCCEEEECCCCCEEEECCCCEEEHHHHHHHHHHCC ARVAVVTAKDKLRRLLGKGLKGICFSSEKADEASVEENGIDHVLELVGKPVPSVYSADLS CEEEEEECHHHHHHHHHCCCCEEEECCCCCCCCCHHHCCHHHHHHHHCCCCCCHHHHHHH EFVFAAGVRLLETRPIDLMYLSTTDYVQHKCAPGTPGANAFYAMMDTYLQRLDALGAIVA HHHHHHCCCEEECCCEEEEEEECCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEE ITADHGMNAKHDDATGEPNVIYLQELFDEWLGHDAARVILPITDPYVVHHGALGSFATVY EEECCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCEEEEE VPGDADTDALRARLAAVDGIEVVLTGAEGCARFELPPARMGDLIVISKQDVVLGTRRIKH ECCCCCHHHHHHHHHHCCCEEEEEECCCCCEECCCCCCCCCCEEEEECCCEEEHHHHHHH DLSGLDVPLRSHGGISEQIVPLIFSKPVATDVTGRARLRNFDIIDIALNHLQ HHCCCCCCHHCCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA