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The map label for this gene is ntaR [H]

Identifier: 116691162

GI number: 116691162

Start: 3462192

End: 3462920

Strand: Reverse

Name: ntaR [H]

Synonym: Bcen2424_3144

Alternate gene names: 116691162

Gene position: 3462920-3462192 (Counterclockwise)

Preceding gene: 116691163

Following gene: 116691160

Centisome position: 99.4

GC content: 68.86

Gene sequence:

>729_bases
ATGACTGCCCCGAACGCGCTCAGCGCCATCGAACTCCTGCAAAGCCAGTCGCTCGCGATGATCGTCCAGGACATGCTCGA
GCGCGCGATCGTCTCCGGCGAATACGCGCCCGGCGAAAAGCTCAACGAAGTCGAGATCGCGACCAGGCTGAACGTGTCGC
GCGGCCCGGTGCGCGAGGCGTTTCGCGCGCTGGAGCAGGCCGGCCTGCTGCGCAACGAGAAGAATCGCGGCGTGACCGTG
CGGGTCGTGCCGCTGCGTGAGGCCGAGGAGATCTACGAAGTGCGCGCGATGCTCGACGAATCGGTCGCACGCGCGCTCGC
GAAGCGCATCTCGCCCGATACGCTGAAGGTGCTGAAGGGCATCATCCAGTCGATGAAGGACGCCGCGAAGACGCACGACG
TCACGCGCTATACCGAGCTGAACGTGCAGTTCCACGACGCGATGGTCGTCGGCGTCGGCAATACCCATCTCACCGATACC
TACCGCCGGCTCGTGCGCCAGCTCGGCCTGCTGCGCCAGGCGGCGATCGAGGCCGAGGCGGATGCGATCGCCGTGTCGGC
GGCCGAGCACGACAAGATCGTGCAGGCGCTCGCGGCCGGCGACGAGGACAAGGCCGTCGCGCTCGTGCGCGAGCACGTCG
CGCACGGCCTCGCGCGGATGCGCCGTACGCACGACGAGCAGGGGCTGCCCGCGACGGGCAAGGCGGCGCGGGAGAAGGCC
GGCGCGTAA

Upstream 100 bases:

>100_bases
ACTGAAAACTGTTGACAATGTGTCGGGCCGGGGGTATACAAGGATCATTCGCCGATATGGCGCCCTCGTTTTCATCCACA
GCCCCGCTGCCTGCCCGACC

Downstream 100 bases:

>100_bases
GCGTCGGTCAATGCCCGCGCGGGCTGCCGCGCACCGGCAAAGGGACGCGTCGCCGCGTCCCTTTTTCGTTGTGCGTTCCG
TTCAGCGTTTCGTCACGCCT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTAPNALSAIELLQSQSLAMIVQDMLERAIVSGEYAPGEKLNEVEIATRLNVSRGPVREAFRALEQAGLLRNEKNRGVTV
RVVPLREAEEIYEVRAMLDESVARALAKRISPDTLKVLKGIIQSMKDAAKTHDVTRYTELNVQFHDAMVVGVGNTHLTDT
YRRLVRQLGLLRQAAIEAEADAIAVSAAEHDKIVQALAAGDEDKAVALVREHVAHGLARMRRTHDEQGLPATGKAAREKA
GA

Sequences:

>Translated_242_residues
MTAPNALSAIELLQSQSLAMIVQDMLERAIVSGEYAPGEKLNEVEIATRLNVSRGPVREAFRALEQAGLLRNEKNRGVTV
RVVPLREAEEIYEVRAMLDESVARALAKRISPDTLKVLKGIIQSMKDAAKTHDVTRYTELNVQFHDAMVVGVGNTHLTDT
YRRLVRQLGLLRQAAIEAEADAIAVSAAEHDKIVQALAAGDEDKAVALVREHVAHGLARMRRTHDEQGLPATGKAAREKA
GA
>Mature_241_residues
TAPNALSAIELLQSQSLAMIVQDMLERAIVSGEYAPGEKLNEVEIATRLNVSRGPVREAFRALEQAGLLRNEKNRGVTVR
VVPLREAEEIYEVRAMLDESVARALAKRISPDTLKVLKGIIQSMKDAAKTHDVTRYTELNVQFHDAMVVGVGNTHLTDTY
RRLVRQLGLLRQAAIEAEADAIAVSAAEHDKIVQALAAGDEDKAVALVREHVAHGLARMRRTHDEQGLPATGKAAREKAG
A

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=121, Percent_Identity=32.2314049586777, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26425; Mature: 26293

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPNALSAIELLQSQSLAMIVQDMLERAIVSGEYAPGEKLNEVEIATRLNVSRGPVREA
CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHH
FRALEQAGLLRNEKNRGVTVRVVPLREAEEIYEVRAMLDESVARALAKRISPDTLKVLKG
HHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
IIQSMKDAAKTHDVTRYTELNVQFHDAMVVGVGNTHLTDTYRRLVRQLGLLRQAAIEAEA
HHHHHHHHHHHHCHHHHHEECEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DAIAVSAAEHDKIVQALAAGDEDKAVALVREHVAHGLARMRRTHDEQGLPATGKAAREKA
HHHEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCC
GA
CC
>Mature Secondary Structure 
TAPNALSAIELLQSQSLAMIVQDMLERAIVSGEYAPGEKLNEVEIATRLNVSRGPVREA
CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHH
FRALEQAGLLRNEKNRGVTVRVVPLREAEEIYEVRAMLDESVARALAKRISPDTLKVLKG
HHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
IIQSMKDAAKTHDVTRYTELNVQFHDAMVVGVGNTHLTDTYRRLVRQLGLLRQAAIEAEA
HHHHHHHHHHHHCHHHHHEECEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DAIAVSAAEHDKIVQALAAGDEDKAVALVREHVAHGLARMRRTHDEQGLPATGKAAREKA
HHHEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCC
GA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA