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The map label for this gene is ybgK [H]

Identifier: 116691056

GI number: 116691056

Start: 3350961

End: 3352028

Strand: Direct

Name: ybgK [H]

Synonym: Bcen2424_3038

Alternate gene names: 116691056

Gene position: 3350961-3352028 (Clockwise)

Preceding gene: 116691055

Following gene: 116691057

Centisome position: 96.18

GC content: 73.78

Gene sequence:

>1068_bases
ATGACCCAGAGCAACGCACCGGGCACCATCGAGGTCGTGCGGGCCGGCCCGCTGTCGACCGTGCAGGATCTCGGCCGCCG
CGGCACGCGCCATCTCGGCGTCGCGCAGGGCGGCGCGCTCGACGGCCTCGCGCTCGAAGTCGGCAACCGGCTGGTCGGCA
ACCGCCCCGACGCGGCGGCCGTCGAAATCACGATCGGCCCCGCCACGTTCCGCTTCACGCGCGCCACGCGCATCGCGATC
ACCGGCACCGAGTTCGGCGCGACGCTCGACGGCAAGCCCGTGCATTCGTGGTGGAGCCTGCCGGTCGACGCCGGGCAGAC
GCTCGTGCTGCCGGCCGCGAAACGCGGCATGCGCGGCTACCTGTGCATCGCGGGCGGCATCGACGTGCTGCCGATGCTCG
GCTCGCGCAGCACCGATCTCGCGTCGCGCTTCGGCGGCCTCGGCGGCCGCACGCTGCGCGACGGCGACCGGCTCCCGGTC
GGCGTGCCGCCGGCCGGCGCGGGCTGCCTTTCGGCCGATGCGCCGGAATTCGGCGTGAAGGCGCCGGCGTGGTGCGCGTT
CGTGCGCGTCGACGAGCCGCCGCGCCGTCACCGCCCCGTGCATGCGCCGTGGGCGATGCCCGTGCGCGTGCTGCCGGGCC
CCGATTACGCGTCGTTCGCGGCCGATTCGCAGCAGGCGTTCTGGGATGAGGAATGGCTCGTCACCGCGAACAGCAACCGG
ATGGGCTATCGGCTCGCCGGCGCCGAGCTCGTGCGCGAGCGGCCAGTCGAGCTGCTGTCGCATGCGGTGCTGCCCGGCAC
GATCCAGGTGCCGCCGAACGGCCAGCCGATCGTGCTGATGCACGACGCGCAGACCACCGGCGGCTACCCGAAGATCGGCA
CGGTGATCCGCGCCGACCTGTGGAAGCTCGCACAGGCGCGGCTCAACCTGCCGATCCGCTTCGTGCGCACGACACTCGAC
GCCGCACGCGCCGCCCTCGTCGCGGAACGGGCGTACCTGCGGCAGATCGACGTCGCGATCGAGATGCGCGAGGAAGCGCG
CCGCCGCGCCCAATCGCGCGCGGCGTGA

Upstream 100 bases:

>100_bases
GCCGCACGTCGCAGGTGCTGTTCGACCCGGCGCGGCCGCAGCCGACGCTGCTGCTGCCCGGCGACCGCGTGCGCTTCACC
ATTGCGGGAGTCGACGCACG

Downstream 100 bases:

>100_bases
CAATGGCGGAAAGCGGTAGCGAAGGACGCGCCACGCAACCAGTGGACGAGGAACATATGGAAATCGATCTGAATGCCGAT
CTCGGCGAAGGATGCGGATC

Product: urea amidolyase related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MTQSNAPGTIEVVRAGPLSTVQDLGRRGTRHLGVAQGGALDGLALEVGNRLVGNRPDAAAVEITIGPATFRFTRATRIAI
TGTEFGATLDGKPVHSWWSLPVDAGQTLVLPAAKRGMRGYLCIAGGIDVLPMLGSRSTDLASRFGGLGGRTLRDGDRLPV
GVPPAGAGCLSADAPEFGVKAPAWCAFVRVDEPPRRHRPVHAPWAMPVRVLPGPDYASFAADSQQAFWDEEWLVTANSNR
MGYRLAGAELVRERPVELLSHAVLPGTIQVPPNGQPIVLMHDAQTTGGYPKIGTVIRADLWKLAQARLNLPIRFVRTTLD
AARAALVAERAYLRQIDVAIEMREEARRRAQSRAA

Sequences:

>Translated_355_residues
MTQSNAPGTIEVVRAGPLSTVQDLGRRGTRHLGVAQGGALDGLALEVGNRLVGNRPDAAAVEITIGPATFRFTRATRIAI
TGTEFGATLDGKPVHSWWSLPVDAGQTLVLPAAKRGMRGYLCIAGGIDVLPMLGSRSTDLASRFGGLGGRTLRDGDRLPV
GVPPAGAGCLSADAPEFGVKAPAWCAFVRVDEPPRRHRPVHAPWAMPVRVLPGPDYASFAADSQQAFWDEEWLVTANSNR
MGYRLAGAELVRERPVELLSHAVLPGTIQVPPNGQPIVLMHDAQTTGGYPKIGTVIRADLWKLAQARLNLPIRFVRTTLD
AARAALVAERAYLRQIDVAIEMREEARRRAQSRAA
>Mature_354_residues
TQSNAPGTIEVVRAGPLSTVQDLGRRGTRHLGVAQGGALDGLALEVGNRLVGNRPDAAAVEITIGPATFRFTRATRIAIT
GTEFGATLDGKPVHSWWSLPVDAGQTLVLPAAKRGMRGYLCIAGGIDVLPMLGSRSTDLASRFGGLGGRTLRDGDRLPVG
VPPAGAGCLSADAPEFGVKAPAWCAFVRVDEPPRRHRPVHAPWAMPVRVLPGPDYASFAADSQQAFWDEEWLVTANSNRM
GYRLAGAELVRERPVELLSHAVLPGTIQVPPNGQPIVLMHDAQTTGGYPKIGTVIRADLWKLAQARLNLPIRFVRTTLDA
ARAALVAERAYLRQIDVAIEMREEARRRAQSRAA

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=328, Percent_Identity=46.3414634146341, Blast_Score=266, Evalue=1e-72,
Organism=Saccharomyces cerevisiae, GI6319685, Length=345, Percent_Identity=29.5652173913043, Blast_Score=128, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 38055; Mature: 37924

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSNAPGTIEVVRAGPLSTVQDLGRRGTRHLGVAQGGALDGLALEVGNRLVGNRPDAAA
CCCCCCCCEEEEEECCCHHHHHHHHHCCCCEECCCCCCCCCCHHHHHCCHHCCCCCCCEE
VEITIGPATFRFTRATRIAITGTEFGATLDGKPVHSWWSLPVDAGQTLVLPAAKRGMRGY
EEEEECCCEEEEEEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCEEEEECCCCCCCEE
LCIAGGIDVLPMLGSRSTDLASRFGGLGGRTLRDGDRLPVGVPPAGAGCLSADAPEFGVK
EEEECCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APAWCAFVRVDEPPRRHRPVHAPWAMPVRVLPGPDYASFAADSQQAFWDEEWLVTANSNR
CCCEEEEEEECCCHHHCCCCCCCCCCCEEEECCCCHHHHCCCCHHHCCCCCEEEEECCCC
MGYRLAGAELVRERPVELLSHAVLPGTIQVPPNGQPIVLMHDAQTTGGYPKIGTVIRADL
CEEEEHHHHHHHHCCHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHH
WKLAQARLNLPIRFVRTTLDAARAALVAERAYLRQIDVAIEMREEARRRAQSRAA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQSNAPGTIEVVRAGPLSTVQDLGRRGTRHLGVAQGGALDGLALEVGNRLVGNRPDAAA
CCCCCCCEEEEEECCCHHHHHHHHHCCCCEECCCCCCCCCCHHHHHCCHHCCCCCCCEE
VEITIGPATFRFTRATRIAITGTEFGATLDGKPVHSWWSLPVDAGQTLVLPAAKRGMRGY
EEEEECCCEEEEEEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCEEEEECCCCCCCEE
LCIAGGIDVLPMLGSRSTDLASRFGGLGGRTLRDGDRLPVGVPPAGAGCLSADAPEFGVK
EEEECCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APAWCAFVRVDEPPRRHRPVHAPWAMPVRVLPGPDYASFAADSQQAFWDEEWLVTANSNR
CCCEEEEEEECCCHHHCCCCCCCCCCCEEEECCCCHHHHCCCCHHHCCCCCEEEEECCCC
MGYRLAGAELVRERPVELLSHAVLPGTIQVPPNGQPIVLMHDAQTTGGYPKIGTVIRADL
CEEEEHHHHHHHHCCHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHH
WKLAQARLNLPIRFVRTTLDAARAALVAERAYLRQIDVAIEMREEARRRAQSRAA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]