| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is flgI [H]
Identifier: 116691036
GI number: 116691036
Start: 3332010
End: 3333185
Strand: Reverse
Name: flgI [H]
Synonym: Bcen2424_3018
Alternate gene names: 116691036
Gene position: 3333185-3332010 (Counterclockwise)
Preceding gene: 116691037
Following gene: 116691035
Centisome position: 95.67
GC content: 69.56
Gene sequence:
>1176_bases ATGCAGCTGCCTCTTTTCCATCGCCTGTCGTTTCGTGCACTCACCGTCGCGCGGTTTGCCGCCTTCGTGCTGGCCGCGTG CATGCTCGGCGCCGCGCCGGCGCACGCGGAACGCCTGAAGGATCTCGCGCAGATCCAGGGCGTGCGCGACAACCCGCTGA TCGGCTATGGCCTCGTCGTCGGCCTCGACGGCACGGGCGACCAGACGATGCAGACGCCGTTCACGACGCAGACGCTCGCG AACATGCTCGCGAACCTCGGCATCTCGATCAACAACGGTTCGGCCAACGGCGGCCCGTCGTCGCTGAACAACATGCAGCT GAAGAACGTCGCGGCCGTGATGGTGACGGCCACGCTGCCGCCGTTCGCGCGGCCCGGCGAGGCGCTCGACGTGACCGTGT CGTCGCTCGGCAACGCGAAGAGCCTGCGCGGCGGCACGCTGCTGCTCACGCCGCTGAAGGGCGCGGACGGGCAGGTGTAC GCGCTCGCGCAGGGCAACATGGCGGTCGGCGGCGCGGGCGCCAGCGCGAACGGCAGCCGCGTGCAGGTGAACCAGCTCGC GGCCGGCCGGATCGTCGGCGGCGCGATCGTCGAGCGCGCGGTGCCGAACGCGATCGCGCAGATGAACGGCGTGCTGCAAC TGCAACTGAACGACATGGACTACGGCACCGCGCAGCGCATCGTGTCCGCGGTCAATTCGAACTTCGGCCCGGGCACCGCG ACGGCGCTCGACGGCCGCACGATCCAGCTCGCCGCGCCGGCCGATTCGGCGCAGCAGGTCGCGTTCATGGCGCGGCTGCA GAACCTCGACGTGAGCCCGGACAAGGCCGCCGCGAAGGTGATCCTGAACGCGCGCACCGGCTCGATCGTGATGAACCAGA TGGTCACGCTGCAGAGCTGCGCGGTCGCGCACGGCAACCTGTCGGTCGTCGTCAACACGCAGCCGGTGGTGTCGCAGCCG GGGCCGTTCTCGAACGGGCAGACGGTGGTCGCGCAGCAGTCGCAGATCCAGTTGAAGCAGGACAACGGCGCGCTGAAGAT GGTGACGGCCGGCGCGAATCTTGCCGACGTCGTGAAGGCGCTGAACACGCTCGGCGCGACGCCCGCGGACCTGATGTCGA TCCTGCAGGCGATGAAGGCGGCCGGCGCGCTGCGCGCCGACCTGGAGGTGATCTAA
Upstream 100 bases:
>100_bases ACGCGAAGATCGAATACTCGTCGAAGGGCTACATCAACGAAGCCGAGACGATGGGCTGGCTGCAGCGCTTCTTCCTCAAC ATCGCGCCGTGGTGATGACG
Downstream 100 bases:
>100_bases ATGGCGGCGAACCTTCCGAACGCAAACGACCTCACGCAGCGCTTCGCGCTCGACGTGCAGGGTTTCGACGCGCTGCGCGC GCAGGCGAAGCAGTCGCCGC
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein [H]
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MQLPLFHRLSFRALTVARFAAFVLAACMLGAAPAHAERLKDLAQIQGVRDNPLIGYGLVVGLDGTGDQTMQTPFTTQTLA NMLANLGISINNGSANGGPSSLNNMQLKNVAAVMVTATLPPFARPGEALDVTVSSLGNAKSLRGGTLLLTPLKGADGQVY ALAQGNMAVGGAGASANGSRVQVNQLAAGRIVGGAIVERAVPNAIAQMNGVLQLQLNDMDYGTAQRIVSAVNSNFGPGTA TALDGRTIQLAAPADSAQQVAFMARLQNLDVSPDKAAAKVILNARTGSIVMNQMVTLQSCAVAHGNLSVVVNTQPVVSQP GPFSNGQTVVAQQSQIQLKQDNGALKMVTAGANLADVVKALNTLGATPADLMSILQAMKAAGALRADLEVI
Sequences:
>Translated_391_residues MQLPLFHRLSFRALTVARFAAFVLAACMLGAAPAHAERLKDLAQIQGVRDNPLIGYGLVVGLDGTGDQTMQTPFTTQTLA NMLANLGISINNGSANGGPSSLNNMQLKNVAAVMVTATLPPFARPGEALDVTVSSLGNAKSLRGGTLLLTPLKGADGQVY ALAQGNMAVGGAGASANGSRVQVNQLAAGRIVGGAIVERAVPNAIAQMNGVLQLQLNDMDYGTAQRIVSAVNSNFGPGTA TALDGRTIQLAAPADSAQQVAFMARLQNLDVSPDKAAAKVILNARTGSIVMNQMVTLQSCAVAHGNLSVVVNTQPVVSQP GPFSNGQTVVAQQSQIQLKQDNGALKMVTAGANLADVVKALNTLGATPADLMSILQAMKAAGALRADLEVI >Mature_391_residues MQLPLFHRLSFRALTVARFAAFVLAACMLGAAPAHAERLKDLAQIQGVRDNPLIGYGLVVGLDGTGDQTMQTPFTTQTLA NMLANLGISINNGSANGGPSSLNNMQLKNVAAVMVTATLPPFARPGEALDVTVSSLGNAKSLRGGTLLLTPLKGADGQVY ALAQGNMAVGGAGASANGSRVQVNQLAAGRIVGGAIVERAVPNAIAQMNGVLQLQLNDMDYGTAQRIVSAVNSNFGPGTA TALDGRTIQLAAPADSAQQVAFMARLQNLDVSPDKAAAKVILNARTGSIVMNQMVTLQSCAVAHGNLSVVVNTQPVVSQP GPFSNGQTVVAQQSQIQLKQDNGALKMVTAGANLADVVKALNTLGATPADLMSILQAMKAAGALRADLEVI
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family [H]
Homologues:
Organism=Escherichia coli, GI1787320, Length=374, Percent_Identity=60.9625668449198, Blast_Score=381, Evalue=1e-107,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001782 [H]
Pfam domain/function: PF02119 FlgI [H]
EC number: NA
Molecular weight: Translated: 40050; Mature: 40050
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLPLFHRLSFRALTVARFAAFVLAACMLGAAPAHAERLKDLAQIQGVRDNPLIGYGLVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEE GLDGTGDQTMQTPFTTQTLANMLANLGISINNGSANGGPSSLNNMQLKNVAAVMVTATLP EECCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHEEEEEEEECCC PFARPGEALDVTVSSLGNAKSLRGGTLLLTPLKGADGQVYALAQGNMAVGGAGASANGSR CCCCCCCEEEEEHHHCCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEECCCCCCCCCE VQVNQLAAGRIVGGAIVERAVPNAIAQMNGVLQLQLNDMDYGTAQRIVSAVNSNFGPGTA EEEEHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCE TALDGRTIQLAAPADSAQQVAFMARLQNLDVSPDKAAAKVILNARTGSIVMNQMVTLQSC EEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHH AVAHGNLSVVVNTQPVVSQPGPFSNGQTVVAQQSQIQLKQDNGALKMVTAGANLADVVKA HEECCCEEEEEECCCCCCCCCCCCCCCEEEEECCEEEEEECCCCEEEEECCCCHHHHHHH LNTLGATPADLMSILQAMKAAGALRADLEVI HHHCCCCHHHHHHHHHHHHHHCCHHCCCCCC >Mature Secondary Structure MQLPLFHRLSFRALTVARFAAFVLAACMLGAAPAHAERLKDLAQIQGVRDNPLIGYGLVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEE GLDGTGDQTMQTPFTTQTLANMLANLGISINNGSANGGPSSLNNMQLKNVAAVMVTATLP EECCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHEEEEEEEECCC PFARPGEALDVTVSSLGNAKSLRGGTLLLTPLKGADGQVYALAQGNMAVGGAGASANGSR CCCCCCCEEEEEHHHCCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEECCCCCCCCCE VQVNQLAAGRIVGGAIVERAVPNAIAQMNGVLQLQLNDMDYGTAQRIVSAVNSNFGPGTA EEEEHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCE TALDGRTIQLAAPADSAQQVAFMARLQNLDVSPDKAAAKVILNARTGSIVMNQMVTLQSC EEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHH AVAHGNLSVVVNTQPVVSQPGPFSNGQTVVAQQSQIQLKQDNGALKMVTAGANLADVVKA HEECCCEEEEEECCCCCCCCCCCCCCCEEEEECCEEEEEECCCCEEEEECCCCHHHHHHH LNTLGATPADLMSILQAMKAAGALRADLEVI HHHCCCCHHHHHHHHHHHHHHCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA