Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116691027

Identifier: 116691027

GI number: 116691027

Start: 3322045

End: 3322791

Strand: Reverse

Name: 116691027

Synonym: Bcen2424_3009

Alternate gene names: NA

Gene position: 3322791-3322045 (Counterclockwise)

Preceding gene: 116691028

Following gene: 116691026

Centisome position: 95.38

GC content: 71.22

Gene sequence:

>747_bases
ATGGATCTCGACGGCGCCAGCCGCAATCTCACTGTCGCCGCGTTGCTGACGCTGTCCGGCGGCTATCTCGACGCGTACAC
GTATGTCGGCCACGGCCACGTGTTCGCGAACACGATGACCGGCAACGTCGCGCTGCTCGGCATCAACCTGTCGGCCGGCG
AATGGGCCGCGGCGCTGCATCACGTGCCGCCGCTCGGCGGCTTCGTGCTCGCGGTGTTCGTCGCGCACCTGCTCGGTCTC
GCCGCGGGGCGCGGCTGGATGCGGCATACGGCGTTCGTGAGCCTGATCGTCGAAATCGCGTTTCTCGGCGTCGCCGCGAG
CGGCCTCGTCGGCGCGTCGAGCGCATGGCTGATTCCGGGCATCTCGTTCGTCGCGACGCTGCAGACGCTGTCGTTCACCC
ATCTCGAGGAACTGTCGTACACGTCGGTGATGACGACCGGCAACCTGCGGCGTGCCGCGCAGAAGCTGTTCGTCGGGCTG
ATCCCGCGCTACGACGCGGGGGCGCTGCACGACTCGGCGCTGCTCGCGACGATCAGTTTCTGTTTCCTGGCCGGCGCGGT
GGTCGGCGGCCTCGTGACGCGGCTCGTGCCGGACATCGCGCTGTGGGGCGCCGTGCTGCTGCTCGTCGGCGCGTTCGCGG
AGATCGTGCGGCGGGCGTGGCGTCGCGCGGGGAACGGCGGCGCGGGCGGCGGGGACGGTAACGGCGACGCGGGCGCCGGC
AGCGACGGGGCGGCGCAGACGGCCTGA

Upstream 100 bases:

>100_bases
GCAGGTGGTGCGCTGATCGGGCTCACGGGCATCGGGCAGTGAGCTGCGCACAACCGCCCTCCCGTGCGCGATACTGGCGC
GACTTTTCACGGGAGGATCG

Downstream 100 bases:

>100_bases
CGGCAGGCGGCAATCGGACAACCCCAAGCCGCAAGTCGCAAGCGGCAAGCGGCAAGCGGCAAGCGGCAAGCGGCAAGCGG
CAAGCGGCAAGCGGCAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MDLDGASRNLTVAALLTLSGGYLDAYTYVGHGHVFANTMTGNVALLGINLSAGEWAAALHHVPPLGGFVLAVFVAHLLGL
AAGRGWMRHTAFVSLIVEIAFLGVAASGLVGASSAWLIPGISFVATLQTLSFTHLEELSYTSVMTTGNLRRAAQKLFVGL
IPRYDAGALHDSALLATISFCFLAGAVVGGLVTRLVPDIALWGAVLLLVGAFAEIVRRAWRRAGNGGAGGGDGNGDAGAG
SDGAAQTA

Sequences:

>Translated_248_residues
MDLDGASRNLTVAALLTLSGGYLDAYTYVGHGHVFANTMTGNVALLGINLSAGEWAAALHHVPPLGGFVLAVFVAHLLGL
AAGRGWMRHTAFVSLIVEIAFLGVAASGLVGASSAWLIPGISFVATLQTLSFTHLEELSYTSVMTTGNLRRAAQKLFVGL
IPRYDAGALHDSALLATISFCFLAGAVVGGLVTRLVPDIALWGAVLLLVGAFAEIVRRAWRRAGNGGAGGGDGNGDAGAG
SDGAAQTA
>Mature_248_residues
MDLDGASRNLTVAALLTLSGGYLDAYTYVGHGHVFANTMTGNVALLGINLSAGEWAAALHHVPPLGGFVLAVFVAHLLGL
AAGRGWMRHTAFVSLIVEIAFLGVAASGLVGASSAWLIPGISFVATLQTLSFTHLEELSYTSVMTTGNLRRAAQKLFVGL
IPRYDAGALHDSALLATISFCFLAGAVVGGLVTRLVPDIALWGAVLLLVGAFAEIVRRAWRRAGNGGAGGGDGNGDAGAG
SDGAAQTA

Specific function: Unknown

COG id: COG3619

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25282; Mature: 25282

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLDGASRNLTVAALLTLSGGYLDAYTYVGHGHVFANTMTGNVALLGINLSAGEWAAALH
CCCCCCCCCEEEEEEEHHCCCCEEHHEEECCCEEEEEEECCCEEEEEEECCCCHHHHHHH
HVPPLGGFVLAVFVAHLLGLAAGRGWMRHTAFVSLIVEIAFLGVAASGLVGASSAWLIPG
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC
ISFVATLQTLSFTHLEELSYTSVMTTGNLRRAAQKLFVGLIPRYDAGALHDSALLATISF
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
CFLAGAVVGGLVTRLVPDIALWGAVLLLVGAFAEIVRRAWRRAGNGGAGGGDGNGDAGAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
SDGAAQTA
CCCCCCCC
>Mature Secondary Structure
MDLDGASRNLTVAALLTLSGGYLDAYTYVGHGHVFANTMTGNVALLGINLSAGEWAAALH
CCCCCCCCCEEEEEEEHHCCCCEEHHEEECCCEEEEEEECCCEEEEEEECCCCHHHHHHH
HVPPLGGFVLAVFVAHLLGLAAGRGWMRHTAFVSLIVEIAFLGVAASGLVGASSAWLIPG
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC
ISFVATLQTLSFTHLEELSYTSVMTTGNLRRAAQKLFVGLIPRYDAGALHDSALLATISF
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
CFLAGAVVGGLVTRLVPDIALWGAVLLLVGAFAEIVRRAWRRAGNGGAGGGDGNGDAGAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
SDGAAQTA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA