| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is ywrA [H]
Identifier: 116691028
GI number: 116691028
Start: 3322850
End: 3323377
Strand: Reverse
Name: ywrA [H]
Synonym: Bcen2424_3010
Alternate gene names: 116691028
Gene position: 3323377-3322850 (Counterclockwise)
Preceding gene: 116691029
Following gene: 116691027
Centisome position: 95.39
GC content: 69.51
Gene sequence:
>528_bases ATGAGCGATACGCTGATCGCCATCACGACGATCTTCAGCCAGTTGTCGCTGCTCGCGTTCGGCGGCGGCAACACGATCCT GCCGGAGATGCAGCGGCAGGTCGTCGACGTGCATCACTGGATGAGCGCGCACGAGTTCACCGCGCTGTTCGCGCTGGCCC AGGCGGCGCCCGGGCCGAACATGATGATCGTCTCGCTGGTCGGCTGGCACGTGGCCGGCTGGGCCGGGCTGCTGGTCGCG TCGCTCGCGAAGTTCGGGCCGTCGTCGATCGTCACCGTGCTCGCGCTGCATGCGTGGGAGCGCTTTCGCGACCGGCCGTG GCGCCGCTACGTGCAGCAGGGGATGATGCCGGTGACGGCCGGGCTCGTCGCGGCAAGCGCGGTGCTGATTTCCGAGGCGT CGAACCGTACCGCGATCCAGTGGGGCATCACGGCCGCGTGCGCGGTGCTGGCGTGGCGCACGCGCATCCATCCGCTGTGG CTGCTCGCAGGTGGTGCGCTGATCGGGCTCACGGGCATCGGGCAGTGA
Upstream 100 bases:
>100_bases CGCGCCGTCGCGATGGGCGCACGCCGCGGCCGGCGCCGGCTGCCGCACCCGGCACGCAGGGTGCGCCCGATGCGCCCCGC TCGCAACAGGAGGGCCGGCC
Downstream 100 bases:
>100_bases GCTGCGCACAACCGCCCTCCCGTGCGCGATACTGGCGCGACTTTTCACGGGAGGATCGATGGATCTCGACGGCGCCAGCC GCAATCTCACTGTCGCCGCG
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSDTLIAITTIFSQLSLLAFGGGNTILPEMQRQVVDVHHWMSAHEFTALFALAQAAPGPNMMIVSLVGWHVAGWAGLLVA SLAKFGPSSIVTVLALHAWERFRDRPWRRYVQQGMMPVTAGLVAASAVLISEASNRTAIQWGITAACAVLAWRTRIHPLW LLAGGALIGLTGIGQ
Sequences:
>Translated_175_residues MSDTLIAITTIFSQLSLLAFGGGNTILPEMQRQVVDVHHWMSAHEFTALFALAQAAPGPNMMIVSLVGWHVAGWAGLLVA SLAKFGPSSIVTVLALHAWERFRDRPWRRYVQQGMMPVTAGLVAASAVLISEASNRTAIQWGITAACAVLAWRTRIHPLW LLAGGALIGLTGIGQ >Mature_174_residues SDTLIAITTIFSQLSLLAFGGGNTILPEMQRQVVDVHHWMSAHEFTALFALAQAAPGPNMMIVSLVGWHVAGWAGLLVAS LAKFGPSSIVTVLALHAWERFRDRPWRRYVQQGMMPVTAGLVAASAVLISEASNRTAIQWGITAACAVLAWRTRIHPLWL LAGGALIGLTGIGQ
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 18794; Mature: 18663
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: PS01036 HSP70_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTLIAITTIFSQLSLLAFGGGNTILPEMQRQVVDVHHWMSAHEFTALFALAQAAPGPN CCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC MMIVSLVGWHVAGWAGLLVASLAKFGPSSIVTVLALHAWERFRDRPWRRYVQQGMMPVTA EEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHH GLVAASAVLISEASNRTAIQWGITAACAVLAWRTRIHPLWLLAGGALIGLTGIGQ HHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCHHHEECCCHHEECCCCCC >Mature Secondary Structure SDTLIAITTIFSQLSLLAFGGGNTILPEMQRQVVDVHHWMSAHEFTALFALAQAAPGPN CCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC MMIVSLVGWHVAGWAGLLVASLAKFGPSSIVTVLALHAWERFRDRPWRRYVQQGMMPVTA EEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHH GLVAASAVLISEASNRTAIQWGITAACAVLAWRTRIHPLWLLAGGALIGLTGIGQ HHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCHHHEECCCHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]