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The map label for this gene is 116691026

Identifier: 116691026

GI number: 116691026

Start: 3320495

End: 3321616

Strand: Reverse

Name: 116691026

Synonym: Bcen2424_3008

Alternate gene names: NA

Gene position: 3321616-3320495 (Counterclockwise)

Preceding gene: 116691027

Following gene: 116691025

Centisome position: 95.34

GC content: 66.04

Gene sequence:

>1122_bases
ATGAAGCAGACCACCCGACTCGCAGTCATCGCAGGGGGCGCGGCGCTGGCCTTCGCCAGCCAGTACGCAGCAGCACAAAG
CTCGGTCACGCTCTGGGGCGTCGCCGACGCCAGCATTCGTTACCTGACCAACGCCAACGCCAAGAACGACGGCCTGCTGT
CGATGACCAACGGCGCGATCACGAACAGCCGCTTCGGCATCTACGGCACGGAAGATCTCGGCGGCGGCCTGAAGGCCGTG
TTCAACCTCGAGAGCGGCGTGAACCTGCAGAACGGCGCGTTCGCCGACAGCGGCCGCCTGTTCAACCGCGCGGCGTACGT
CGGCCTGCAGAGCCCGTACGGCACGGTGACCCTCGGTCGCCAGAAGACGCCGCTGTTCGACCTGCTGTCGGACACCTACG
ATCCTCTGACGGTCGGCAACTACCTCGAAAACGCGTGGCTGCCGGTCGCACTCGGCGGCGGCCTGTATGCGGACAACCAG
ATCAAGTACACGGGCAAGTTCGAGGGCCTGACGGCGAAGGCGATGTACTCGACCGGCACCAACTACGAATCGACCGGCGC
CGGCGGCTTCTCGGGCCAGATTCCGGGTTCGCTCGGCAAGGGCAATGCGTGGGGCGTGTCGCTGTCGTACGTGATGGGCC
CGCTCAGCATCGCGGCCGGTGCGCAGCAGAACAGCGACAACTCGGCGCGCAAGCAGACGATCTACCACGCGAACGTCGTG
TACGCGTTCAGCAAGGCGAAGATCTACGCGGGCTACCTGCGCTCGAAGGACGACACGGGCTTCGTCGACAGCCTGCTCGC
GCAGCAGTCGATTCCGGTCGCGAAGGGCACGGGCCGGATCGACGACGGTCCGTTCGCGGGCGTGAGCTGGCAGGTCAGCG
CGCCGCTGACGCTGACGGGCGCGTTCTACTACGACCACATGCGCAATGCGATGACCACGAACGGCACGCTCGCGAGCGGC
AACCGCTACGCGATCGTCGGCATCGCCGAGTACGCGCTGAGCAAGCGCACCGAAATCTACGGCACCGTCGACTTCAACAA
GACGAACGGCGCGGCGAACGTCGAGCTGCCCGGCCGCAGCAACCAGACGGGCATCGCGATCGGCCTGCGCAATATCTTCT
GA

Upstream 100 bases:

>100_bases
TGATTCAGCCCACATCGCGCACGCCATGAACGTGTGCGATCGCCACCCGGTTGCGCACGCGGCCGGCCATGAATGGAGAC
ACCTACAAAAGGGAAAGCTC

Downstream 100 bases:

>100_bases
CGAACGTCGGAACGCACGGGCCGGCTTCGTCCGGCACGCATCGAAGAGGCTCCGCGAGGGGCCTCTTTTTTTTCGTCACG
CGAGCTTCAATGCGAGCTTC

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKQTTRLAVIAGGAALAFASQYAAAQSSVTLWGVADASIRYLTNANAKNDGLLSMTNGAITNSRFGIYGTEDLGGGLKAV
FNLESGVNLQNGAFADSGRLFNRAAYVGLQSPYGTVTLGRQKTPLFDLLSDTYDPLTVGNYLENAWLPVALGGGLYADNQ
IKYTGKFEGLTAKAMYSTGTNYESTGAGGFSGQIPGSLGKGNAWGVSLSYVMGPLSIAAGAQQNSDNSARKQTIYHANVV
YAFSKAKIYAGYLRSKDDTGFVDSLLAQQSIPVAKGTGRIDDGPFAGVSWQVSAPLTLTGAFYYDHMRNAMTTNGTLASG
NRYAIVGIAEYALSKRTEIYGTVDFNKTNGAANVELPGRSNQTGIAIGLRNIF

Sequences:

>Translated_373_residues
MKQTTRLAVIAGGAALAFASQYAAAQSSVTLWGVADASIRYLTNANAKNDGLLSMTNGAITNSRFGIYGTEDLGGGLKAV
FNLESGVNLQNGAFADSGRLFNRAAYVGLQSPYGTVTLGRQKTPLFDLLSDTYDPLTVGNYLENAWLPVALGGGLYADNQ
IKYTGKFEGLTAKAMYSTGTNYESTGAGGFSGQIPGSLGKGNAWGVSLSYVMGPLSIAAGAQQNSDNSARKQTIYHANVV
YAFSKAKIYAGYLRSKDDTGFVDSLLAQQSIPVAKGTGRIDDGPFAGVSWQVSAPLTLTGAFYYDHMRNAMTTNGTLASG
NRYAIVGIAEYALSKRTEIYGTVDFNKTNGAANVELPGRSNQTGIAIGLRNIF
>Mature_373_residues
MKQTTRLAVIAGGAALAFASQYAAAQSSVTLWGVADASIRYLTNANAKNDGLLSMTNGAITNSRFGIYGTEDLGGGLKAV
FNLESGVNLQNGAFADSGRLFNRAAYVGLQSPYGTVTLGRQKTPLFDLLSDTYDPLTVGNYLENAWLPVALGGGLYADNQ
IKYTGKFEGLTAKAMYSTGTNYESTGAGGFSGQIPGSLGKGNAWGVSLSYVMGPLSIAAGAQQNSDNSARKQTIYHANVV
YAFSKAKIYAGYLRSKDDTGFVDSLLAQQSIPVAKGTGRIDDGPFAGVSWQVSAPLTLTGAFYYDHMRNAMTTNGTLASG
NRYAIVGIAEYALSKRTEIYGTVDFNKTNGAANVELPGRSNQTGIAIGLRNIF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39244; Mature: 39244

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTTRLAVIAGGAALAFASQYAAAQSSVTLWGVADASIRYLTNANAKNDGLLSMTNGAI
CCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCEEEEECCCE
TNSRFGIYGTEDLGGGLKAVFNLESGVNLQNGAFADSGRLFNRAAYVGLQSPYGTVTLGR
ECCCCEEEECHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECC
QKTPLFDLLSDTYDPLTVGNYLENAWLPVALGGGLYADNQIKYTGKFEGLTAKAMYSTGT
CCCCHHHHHHCCCCCCCHHHHHHCCEEEEEECCCEEECCEEEEEEEECCEEEEEEEECCC
NYESTGAGGFSGQIPGSLGKGNAWGVSLSYVMGPLSIAAGAQQNSDNSARKQTIYHANVV
CCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHCCHHHCCCCCCCCCCCHHHEEEEEEEEE
YAFSKAKIYAGYLRSKDDTGFVDSLLAQQSIPVAKGTGRIDDGPFAGVSWQVSAPLTLTG
EEEECCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEE
AFYYDHMRNAMTTNGTLASGNRYAIVGIAEYALSKRTEIYGTVDFNKTNGAANVELPGRS
HHHHHHHHHCCCCCCEEECCCEEEEEEEHHHHHCCCCEEEEEEEECCCCCEEEEEECCCC
NQTGIAIGLRNIF
CCCEEEEEEECCC
>Mature Secondary Structure
MKQTTRLAVIAGGAALAFASQYAAAQSSVTLWGVADASIRYLTNANAKNDGLLSMTNGAI
CCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCEEEEECCCE
TNSRFGIYGTEDLGGGLKAVFNLESGVNLQNGAFADSGRLFNRAAYVGLQSPYGTVTLGR
ECCCCEEEECHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECC
QKTPLFDLLSDTYDPLTVGNYLENAWLPVALGGGLYADNQIKYTGKFEGLTAKAMYSTGT
CCCCHHHHHHCCCCCCCHHHHHHCCEEEEEECCCEEECCEEEEEEEECCEEEEEEEECCC
NYESTGAGGFSGQIPGSLGKGNAWGVSLSYVMGPLSIAAGAQQNSDNSARKQTIYHANVV
CCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHCCHHHCCCCCCCCCCCHHHEEEEEEEEE
YAFSKAKIYAGYLRSKDDTGFVDSLLAQQSIPVAKGTGRIDDGPFAGVSWQVSAPLTLTG
EEEECCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEE
AFYYDHMRNAMTTNGTLASGNRYAIVGIAEYALSKRTEIYGTVDFNKTNGAANVELPGRS
HHHHHHHHHCCCCCCEEECCCEEEEEEEHHHHHCCCCEEEEEEEECCCCCEEEEEECCCC
NQTGIAIGLRNIF
CCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]