| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is gor [H]
Identifier: 116691024
GI number: 116691024
Start: 3318288
End: 3319643
Strand: Reverse
Name: gor [H]
Synonym: Bcen2424_3006
Alternate gene names: 116691024
Gene position: 3319643-3318288 (Counterclockwise)
Preceding gene: 116691025
Following gene: 116691023
Centisome position: 95.29
GC content: 68.58
Gene sequence:
>1356_bases ATGGATTTCGACTACGACCTGTTCGTCATCGGCGCCGGCTCGGGCGGCGTGCGGCTCGCACGCATGTCCGCGTCATACGG CGCACGCGTCGGCATAGCGGAAGAGGAGCAGATCGGTGGCACCTGCGTGCTGCGCGGCTGCATCCCGAAGAAGCTGCTCG TCTACGCGTCGCACTACCCGCACGAAGTCGACGACGCGAAGGGCTTCGGCTGGACCTTTGGCGCCGGCACGCTCGACTGG CCCGCGCTGATCGCCGCGAAGGATCGCGAGATCAACCGGCTGAGCGACATCTACATCAACCTGCTGCGGCAATCGGGCGT CGACATGCACACCGGCCGCGCGACGCTCGTCGATGCGCATACCGTCGCGATCGGCGAGCGCACGATCCGCGCGCGCCACA TCGCGATCGCGACCGGCTCGCGGCCGTCGCTGCCGCCGCGGCCCGGCATCGAGCATGCGATCACGTCGCGCGAGGCGCTG TCGCTCGCGGCGCTGCCCAAACGCATCGCGGTGGTCGGCGGCGGCTATATCGCGGTCGAGTTCGCGGGCATCTTCAACGG TTTCGGCAGCCACGTCGAGCTGTTCTATCGCGGCGAGCAAATCCTGCGCGGCTTCGACGACGACGTGCGTCAATTCCTGA CCGACGAGATGACGAAGCAGGGCGTCACGATTCATGCGCGCGCGGTGATCGAATCGATCGAGCGCGCAGATGACGGCACG CTGTTCGTGCAGGTCGGCGACGCGCGGCACGGGCCGTACGATCAGGTGCTCTATGCGACCGGCCGCGTGCCGAACGTCGA CGGAATCGGGCTCGAGCAGGCGGGCATCCTGCTCGATGCGCGCGGCGCGATTGCCGTCGATGCATATTCGGCGACGTCGG TGCCGTCGATCCACGCGATCGGTGACGTCACGTCGCGGCCGCAGCTCACGCCGGTCGCGACGCGCGACGCCGGGCTACTC GCGCGCACGTTGTTCGGCGGGTCGCGTGTGGCGGTCGACCACGCGTACGTGCCGTCGGCCGTGTTCAGCCAGCCCGAGGT CGCGACGGTCGGCCTGACCGAAGCCGATGCGCGTCGTACGCTGGGCGACGTCGACATCTACCGCACGTCGTTCAAGGCGC TGCGTCACACGCTGTCGGGCCGCGACGAGCGCACGCTGATGAAGCTCGTCGTCGCGCGCGACAGCCAGCGCGTGGTCGGC GCGCACATGGTCGGCCGCGACGCGGGCGAGATCATCCAGGGCATCGCGATCGCGATTCGCGCGGGCGCGACGAAGGCGCA GTTCGACGACACGATCGGCATTCATCCGACCGCAGCCGAGGAATTCGTGACGATGCGGCAGAAGGTGGCCGATTAG
Upstream 100 bases:
>100_bases TCTCGCCGTTTTTTATTGGGCGCGCGGCACGCACCACGCGCCGCACGAATTCCCGAATCTTGCTATCGTCCCTCCATCCG AACTGCGATGAGGGAATGCG
Downstream 100 bases:
>100_bases CAGGAACCGGGAAACCACGCGCGCGTTTGCACCGATGCACGCGCGCGCGCGGCCGGCATGCCGAACGGCGTATTTTCGAG ATATCGATCGTTCGGATCGA
Product: glutathione-disulfide reductase
Products: NA
Alternate protein names: GR; GRase [H]
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MDFDYDLFVIGAGSGGVRLARMSASYGARVGIAEEEQIGGTCVLRGCIPKKLLVYASHYPHEVDDAKGFGWTFGAGTLDW PALIAAKDREINRLSDIYINLLRQSGVDMHTGRATLVDAHTVAIGERTIRARHIAIATGSRPSLPPRPGIEHAITSREAL SLAALPKRIAVVGGGYIAVEFAGIFNGFGSHVELFYRGEQILRGFDDDVRQFLTDEMTKQGVTIHARAVIESIERADDGT LFVQVGDARHGPYDQVLYATGRVPNVDGIGLEQAGILLDARGAIAVDAYSATSVPSIHAIGDVTSRPQLTPVATRDAGLL ARTLFGGSRVAVDHAYVPSAVFSQPEVATVGLTEADARRTLGDVDIYRTSFKALRHTLSGRDERTLMKLVVARDSQRVVG AHMVGRDAGEIIQGIAIAIRAGATKAQFDDTIGIHPTAAEEFVTMRQKVAD
Sequences:
>Translated_451_residues MDFDYDLFVIGAGSGGVRLARMSASYGARVGIAEEEQIGGTCVLRGCIPKKLLVYASHYPHEVDDAKGFGWTFGAGTLDW PALIAAKDREINRLSDIYINLLRQSGVDMHTGRATLVDAHTVAIGERTIRARHIAIATGSRPSLPPRPGIEHAITSREAL SLAALPKRIAVVGGGYIAVEFAGIFNGFGSHVELFYRGEQILRGFDDDVRQFLTDEMTKQGVTIHARAVIESIERADDGT LFVQVGDARHGPYDQVLYATGRVPNVDGIGLEQAGILLDARGAIAVDAYSATSVPSIHAIGDVTSRPQLTPVATRDAGLL ARTLFGGSRVAVDHAYVPSAVFSQPEVATVGLTEADARRTLGDVDIYRTSFKALRHTLSGRDERTLMKLVVARDSQRVVG AHMVGRDAGEIIQGIAIAIRAGATKAQFDDTIGIHPTAAEEFVTMRQKVAD >Mature_451_residues MDFDYDLFVIGAGSGGVRLARMSASYGARVGIAEEEQIGGTCVLRGCIPKKLLVYASHYPHEVDDAKGFGWTFGAGTLDW PALIAAKDREINRLSDIYINLLRQSGVDMHTGRATLVDAHTVAIGERTIRARHIAIATGSRPSLPPRPGIEHAITSREAL SLAALPKRIAVVGGGYIAVEFAGIFNGFGSHVELFYRGEQILRGFDDDVRQFLTDEMTKQGVTIHARAVIESIERADDGT LFVQVGDARHGPYDQVLYATGRVPNVDGIGLEQAGILLDARGAIAVDAYSATSVPSIHAIGDVTSRPQLTPVATRDAGLL ARTLFGGSRVAVDHAYVPSAVFSQPEVATVGLTEADARRTLGDVDIYRTSFKALRHTLSGRDERTLMKLVVARDSQRVVG AHMVGRDAGEIIQGIAIAIRAGATKAQFDDTIGIHPTAAEEFVTMRQKVAD
Specific function: Maintains high levels of reduced glutathione in the cytosol [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI50301238, Length=460, Percent_Identity=37.6086956521739, Blast_Score=289, Evalue=5e-78, Organism=Homo sapiens, GI22035672, Length=471, Percent_Identity=37.1549893842887, Blast_Score=242, Evalue=5e-64, Organism=Homo sapiens, GI148277065, Length=473, Percent_Identity=34.8837209302326, Blast_Score=234, Evalue=9e-62, Organism=Homo sapiens, GI33519430, Length=473, Percent_Identity=34.8837209302326, Blast_Score=234, Evalue=9e-62, Organism=Homo sapiens, GI33519428, Length=473, Percent_Identity=34.8837209302326, Blast_Score=234, Evalue=9e-62, Organism=Homo sapiens, GI33519426, Length=473, Percent_Identity=34.8837209302326, Blast_Score=234, Evalue=9e-62, Organism=Homo sapiens, GI291045266, Length=476, Percent_Identity=34.453781512605, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI148277071, Length=473, Percent_Identity=34.8837209302326, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI291045268, Length=473, Percent_Identity=32.5581395348837, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI91199540, Length=458, Percent_Identity=30.3493449781659, Blast_Score=190, Evalue=3e-48, Organism=Escherichia coli, GI1789915, Length=428, Percent_Identity=40.1869158878505, Blast_Score=325, Evalue=2e-90, Organism=Escherichia coli, GI1786307, Length=449, Percent_Identity=29.6213808463252, Blast_Score=182, Evalue=4e-47, Organism=Escherichia coli, GI87082354, Length=459, Percent_Identity=29.4117647058824, Blast_Score=176, Evalue=4e-45, Organism=Escherichia coli, GI87081717, Length=451, Percent_Identity=31.4855875831486, Blast_Score=167, Evalue=1e-42, Organism=Caenorhabditis elegans, GI71983419, Length=448, Percent_Identity=36.6071428571429, Blast_Score=266, Evalue=1e-71, Organism=Caenorhabditis elegans, GI71983429, Length=448, Percent_Identity=36.6071428571429, Blast_Score=266, Evalue=2e-71, Organism=Caenorhabditis elegans, GI17557007, Length=467, Percent_Identity=33.6188436830835, Blast_Score=256, Evalue=1e-68, Organism=Caenorhabditis elegans, GI71982272, Length=482, Percent_Identity=32.1576763485477, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI32565766, Length=458, Percent_Identity=32.3144104803493, Blast_Score=204, Evalue=8e-53, Organism=Saccharomyces cerevisiae, GI6325166, Length=461, Percent_Identity=36.8763557483731, Blast_Score=296, Evalue=6e-81, Organism=Saccharomyces cerevisiae, GI6321091, Length=466, Percent_Identity=28.755364806867, Blast_Score=170, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6325240, Length=464, Percent_Identity=26.7241379310345, Blast_Score=144, Evalue=2e-35, Organism=Drosophila melanogaster, GI24640553, Length=469, Percent_Identity=37.1002132196162, Blast_Score=270, Evalue=1e-72, Organism=Drosophila melanogaster, GI24640549, Length=469, Percent_Identity=37.1002132196162, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI24640551, Length=469, Percent_Identity=37.1002132196162, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI17737741, Length=471, Percent_Identity=34.6072186836518, Blast_Score=242, Evalue=3e-64, Organism=Drosophila melanogaster, GI21358499, Length=455, Percent_Identity=31.4285714285714, Blast_Score=205, Evalue=4e-53,
Paralogues:
None
Copy number: 650 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR006324 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.7 [H]
Molecular weight: Translated: 48365; Mature: 48365
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFDYDLFVIGAGSGGVRLARMSASYGARVGIAEEEQIGGTCVLRGCIPKKLLVYASHYP CCCCEEEEEEECCCCCEEEEEECCCCCCEECCCCHHHCCCEEEEECCCCCCCEEEECCCC HEVDDAKGFGWTFGAGTLDWPALIAAKDREINRLSDIYINLLRQSGVDMHTGRATLVDAH CCCCCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEECCCEEEEEEE TVAIGERTIRARHIAIATGSRPSLPPRPGIEHAITSREALSLAALPKRIAVVGGGYIAVE EEEECCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEEE FAGIFNGFGSHVELFYRGEQILRGFDDDVRQFLTDEMTKQGVTIHARAVIESIERADDGT EEHHHCCCCCEEEEEECCHHHHCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCE LFVQVGDARHGPYDQVLYATGRVPNVDGIGLEQAGILLDARGAIAVDAYSATSVPSIHAI EEEEECCCCCCCCHHEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCEEEC GDVTSRPQLTPVATRDAGLLARTLFGGSRVAVDHAYVPSAVFSQPEVATVGLTEADARRT CCCCCCCCCCEECCCCCHHHHHHHCCCCEEEEECCCCCHHHCCCCCEEEEECCHHHHHHH LGDVDIYRTSFKALRHTLSGRDERTLMKLVVARDSQRVVGAHMVGRDAGEIIQGIAIAIR HCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEHHHHCCCHHHHHHHHHEEEE AGATKAQFDDTIGIHPTAAEEFVTMRQKVAD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MDFDYDLFVIGAGSGGVRLARMSASYGARVGIAEEEQIGGTCVLRGCIPKKLLVYASHYP CCCCEEEEEEECCCCCEEEEEECCCCCCEECCCCHHHCCCEEEEECCCCCCCEEEECCCC HEVDDAKGFGWTFGAGTLDWPALIAAKDREINRLSDIYINLLRQSGVDMHTGRATLVDAH CCCCCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEECCCEEEEEEE TVAIGERTIRARHIAIATGSRPSLPPRPGIEHAITSREALSLAALPKRIAVVGGGYIAVE EEEECCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEEE FAGIFNGFGSHVELFYRGEQILRGFDDDVRQFLTDEMTKQGVTIHARAVIESIERADDGT EEHHHCCCCCEEEEEECCHHHHCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCE LFVQVGDARHGPYDQVLYATGRVPNVDGIGLEQAGILLDARGAIAVDAYSATSVPSIHAI EEEEECCCCCCCCHHEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCEEEC GDVTSRPQLTPVATRDAGLLARTLFGGSRVAVDHAYVPSAVFSQPEVATVGLTEADARRT CCCCCCCCCCEECCCCCHHHHHHHCCCCEEEEECCCCCHHHCCCCCEEEEECCHHHHHHH LGDVDIYRTSFKALRHTLSGRDERTLMKLVVARDSQRVVGAHMVGRDAGEIIQGIAIAIR HCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEHHHHCCCHHHHHHHHHEEEE AGATKAQFDDTIGIHPTAAEEFVTMRQKVAD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7559423; 11759840 [H]