Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116690993

Identifier: 116690993

GI number: 116690993

Start: 3289609

End: 3289830

Strand: Direct

Name: 116690993

Synonym: Bcen2424_2975

Alternate gene names: NA

Gene position: 3289609-3289830 (Clockwise)

Preceding gene: 116690992

Following gene: 116690996

Centisome position: 94.42

GC content: 60.36

Gene sequence:

>222_bases
ATGGACACGAACACGTTCACCAAAGGCATCTATACGGCCAAGGCGCATACGCACCGCGCGGACAACGGCGAGTTTCAGGG
CTACGTGATCCTCGCGCGGGACGACGGCGACGAGACGGAGAACATGCGCTACGACGTTCACACGACGAGTTCGAGCGAGG
AAGAAGCGTTCGAGGAAGCGAAGGCGCTTGCGCACCGGATCCTCGGCGAAATCGAGCTGTAA

Upstream 100 bases:

>100_bases
GGCAGTACGGTGGCCGATCGCCGATCGGTCACCGATAAGCGGCGCTGTACATGTTGCGCCGCAGTGCTACGATGAAGTGT
CCTTTTCGCGGGAGAGCACG

Downstream 100 bases:

>100_bases
CGCGCGAACTGTCATGCGCGCGCCGCGGCCCGGCCGCGCCGTCTTCGGCTCAGAGCAGCCGCGCCACCATCGAGACCAGC
ATCGTCAGCACCAGCGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MDTNTFTKGIYTAKAHTHRADNGEFQGYVILARDDGDETENMRYDVHTTSSSEEEAFEEAKALAHRILGEIEL

Sequences:

>Translated_73_residues
MDTNTFTKGIYTAKAHTHRADNGEFQGYVILARDDGDETENMRYDVHTTSSSEEEAFEEAKALAHRILGEIEL
>Mature_73_residues
MDTNTFTKGIYTAKAHTHRADNGEFQGYVILARDDGDETENMRYDVHTTSSSEEEAFEEAKALAHRILGEIEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8249; Mature: 8249

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTNTFTKGIYTAKAHTHRADNGEFQGYVILARDDGDETENMRYDVHTTSSSEEEAFEEA
CCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHH
KALAHRILGEIEL
HHHHHHHHHCCCC
>Mature Secondary Structure
MDTNTFTKGIYTAKAHTHRADNGEFQGYVILARDDGDETENMRYDVHTTSSSEEEAFEEA
CCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHH
KALAHRILGEIEL
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA