| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is cscK [H]
Identifier: 116690992
GI number: 116690992
Start: 3288577
End: 3289485
Strand: Direct
Name: cscK [H]
Synonym: Bcen2424_2974
Alternate gene names: 116690992
Gene position: 3288577-3289485 (Clockwise)
Preceding gene: 116690991
Following gene: 116690993
Centisome position: 94.39
GC content: 74.26
Gene sequence:
>909_bases ATGAGCGGCGGCACGTTTCCGGCTTTCGTGTCGGCGGGCGACATCCTGACCGACATGGTGCGCGCGGGCGACGCGCAGTG GACGTCGGTGCCGGGCGGCGCCGGCTGGAACGTCGCGCGCGCGGTCGCCCGGCTCGGCGTGCCGAGCGCGCTCGCCGGCT CGATCGGCGAAGACTGCTTCTCCGACGTGCTGTGGCACACGAGCGAAGCGGCCGGCCTCGACCTGCGCTTCCTGCAACGG GTCGCGCGGCCGCCGCTGCTCGCGATCGTCCACGAGACGCGCCCGCCCGCGTACTTCTTCATCGGCGAAGCGAGCGCCGA TCTCGCGTTCAACCCGGCGCGGCTGCCGGCCGGCTGGACCGAGCACGTGCAATGGGCGCACTTCGGCTGCATCAGCCTCG TGCGCGAACCGCTCGCGGGCACGCTGGCCGCGCTCGCGGCCGACCTGCACGCGCGCGGCGTGAAGATCAGCTTCGATCCG AACGTGCGGAACCTGATGACGGCCGCGTACCGGCCGACGCTGGAGAAGATGGCCGCCCTCGCCGACCTGATCAAGGTGTC CGACGAAGACCTGCGGCACCTGTTCGGCGACGACGGCCCCGACGCGATCGCGGCCGTGCGCGCGCTGAACCCGCGGGCGG CCGTGCTCGTCACGCGCGGCGCGCAAGCCGCCACGCTCTACGCCGACGGCGACGTGCACGAAGCCAGCCCGCCGCGCGTG GAGGTGGCCGACACCGTCGGCGCGGGAGACGCGTCGATCGGCGGCCTGCTGTTCAGCCTGATGGCCGCGCCGCAGCGCGG CTGGCGCGAGCATCTCGCGTTCGCGGTGGCGGCCGGCGCCGCCGCGTGCCGGCACACGGGCGCGCACGCGCCGACGCTCG ACGAGGTCGTCGCGCTGCTCGAAGGATGA
Upstream 100 bases:
>100_bases ACGAGAAGAGCCCGGCCGGCAAGACCGACTATCACACGATGGGCGCCTGCTACGACGTGCTCGCGACCCTCGCGCGCACG CAACGCAGCGAGCCGACGCA
Downstream 100 bases:
>100_bases AGGGACGTTGAAGGAACGACGCAGGCAGTACGGTGGCCGATCGCCGATCGGTCACCGATAAGCGGCGCTGTACATGTTGC GCCGCAGTGCTACGATGAAG
Product: ribokinase-like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSGGTFPAFVSAGDILTDMVRAGDAQWTSVPGGAGWNVARAVARLGVPSALAGSIGEDCFSDVLWHTSEAAGLDLRFLQR VARPPLLAIVHETRPPAYFFIGEASADLAFNPARLPAGWTEHVQWAHFGCISLVREPLAGTLAALAADLHARGVKISFDP NVRNLMTAAYRPTLEKMAALADLIKVSDEDLRHLFGDDGPDAIAAVRALNPRAAVLVTRGAQAATLYADGDVHEASPPRV EVADTVGAGDASIGGLLFSLMAAPQRGWREHLAFAVAAGAAACRHTGAHAPTLDEVVALLEG
Sequences:
>Translated_302_residues MSGGTFPAFVSAGDILTDMVRAGDAQWTSVPGGAGWNVARAVARLGVPSALAGSIGEDCFSDVLWHTSEAAGLDLRFLQR VARPPLLAIVHETRPPAYFFIGEASADLAFNPARLPAGWTEHVQWAHFGCISLVREPLAGTLAALAADLHARGVKISFDP NVRNLMTAAYRPTLEKMAALADLIKVSDEDLRHLFGDDGPDAIAAVRALNPRAAVLVTRGAQAATLYADGDVHEASPPRV EVADTVGAGDASIGGLLFSLMAAPQRGWREHLAFAVAAGAAACRHTGAHAPTLDEVVALLEG >Mature_301_residues SGGTFPAFVSAGDILTDMVRAGDAQWTSVPGGAGWNVARAVARLGVPSALAGSIGEDCFSDVLWHTSEAAGLDLRFLQRV ARPPLLAIVHETRPPAYFFIGEASADLAFNPARLPAGWTEHVQWAHFGCISLVREPLAGTLAALAADLHARGVKISFDPN VRNLMTAAYRPTLEKMAALADLIKVSDEDLRHLFGDDGPDAIAAVRALNPRAAVLVTRGAQAATLYADGDVHEASPPRVE VADTVGAGDASIGGLLFSLMAAPQRGWREHLAFAVAAGAAACRHTGAHAPTLDEVVALLEG
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 31549; Mature: 31418
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGTFPAFVSAGDILTDMVRAGDAQWTSVPGGAGWNVARAVARLGVPSALAGSIGEDCF CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH SDVLWHTSEAAGLDLRFLQRVARPPLLAIVHETRPPAYFFIGEASADLAFNPARLPAGWT HHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCEECCCCCCCCHH EHVQWAHFGCISLVREPLAGTLAALAADLHARGVKISFDPNVRNLMTAAYRPTLEKMAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHH ADLIKVSDEDLRHLFGDDGPDAIAAVRALNPRAAVLVTRGAQAATLYADGDVHEASPPRV HHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCE EVADTVGAGDASIGGLLFSLMAAPQRGWREHLAFAVAAGAAACRHTGAHAPTLDEVVALL EEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH EG CC >Mature Secondary Structure SGGTFPAFVSAGDILTDMVRAGDAQWTSVPGGAGWNVARAVARLGVPSALAGSIGEDCF CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH SDVLWHTSEAAGLDLRFLQRVARPPLLAIVHETRPPAYFFIGEASADLAFNPARLPAGWT HHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCEECCCCCCCCHH EHVQWAHFGCISLVREPLAGTLAALAADLHARGVKISFDPNVRNLMTAAYRPTLEKMAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHH ADLIKVSDEDLRHLFGDDGPDAIAAVRALNPRAAVLVTRGAQAATLYADGDVHEASPPRV HHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCE EVADTVGAGDASIGGLLFSLMAAPQRGWREHLAFAVAAGAAACRHTGAHAPTLDEVVALL EEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH EG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA