| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690983
Identifier: 116690983
GI number: 116690983
Start: 3276932
End: 3277891
Strand: Direct
Name: 116690983
Synonym: Bcen2424_2965
Alternate gene names: NA
Gene position: 3276932-3277891 (Clockwise)
Preceding gene: 116690981
Following gene: 116690988
Centisome position: 94.06
GC content: 66.67
Gene sequence:
>960_bases ATGGCATTGCCCACCGTCCTGCAGAACCTGACGCTGCCCGTCATCGCGTCGCCGATGTTCATCGTCAGCTATCCCGAACT CGTGCTCGCGCAATGCAAGGCGGGCATCGTCGGTTCGTTCCCCGCGCTCAACGCGCGCCCGGCCGAACTGCTCGACGCGT GGCTCACGCAGATCCAGTCGGAACTCGCCGACCACAAGGCAAAACATCCCGACGCGGTGATCGGCCCGATCGCGGTCAAC CAGATCGTCCACCAGTCGAACGCGCGGCTCGAGCACGACGTGCGCGTGTGCGTCGAGCACAAGGTGCCGATCTTCATCAC GAGCCTGCGCGCACCGGCGCGCGAGATCGTCGACGCGGTGCACAGCTACGGCGGCATCGTGCTGCACGACGTGATCAACC TGCGGCACGCGCAGAAGGCGCTCGAAGCGGGCGTCGACGGGCTGATCCTCGTCGCGGCCGGCGCCGGCGGCCACGCGGGC ACGACGTCGCCGTTCGCGCTGGTCGGCGAAGTGCGCAAGATCTTCGACGGCCCGATCGTGCTGTCCGGCTCGATCGCGAA CGGCGGCTCGATCCTCGCCGCACAGGCGATGGGCGCCGACTTCGCGTACATGGGCACGCGTTTCATCGCGACGCAGGAGG CGCACGCGATCGACGACTACAAGCACGCGATCCTGAACGCGAAATCGTCGGACATCATCTACACGAACCTCTTCACCGGC GTGCACGGCAACTACATCCGCGAGAGCATCGAGAAGGCCGGCCTCGATCCGGACGCACTGCCGGAATCCGACAAGACCAA GATGAATTTCGGCAGCGACAAGACCAAGGCGTGGAAGGACATCTGGGGCGCCGGCCAGGGCGTCGGCCTGATGGACGACC TGCCGAGCGTAGGTACGCTCGTCGAGCGGCTCAAGCGCGAGTACGACGACGCGAAGGCGCGGCTCGGCATCCCGCGCTGA
Upstream 100 bases:
>100_bases CGACCGTTCGTATTAATATGAACGAACGCGTTGCGCAGCTACACTCAATACACTCGAATCACCGTCCGATCGCAACGCCC CCGGAGACTGGAGACATCAC
Downstream 100 bases:
>100_bases CGGAGGCGGCGGCCGGCGCGGTCGCCATCGACGCGAGATCGTCGAACCAAACAAAATCTATGGTCAGCCCGATTTTTGCA AGCGAGGCAGTGTTGACCTA
Product: 2-nitropropane dioxygenase, NPD
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MALPTVLQNLTLPVIASPMFIVSYPELVLAQCKAGIVGSFPALNARPAELLDAWLTQIQSELADHKAKHPDAVIGPIAVN QIVHQSNARLEHDVRVCVEHKVPIFITSLRAPAREIVDAVHSYGGIVLHDVINLRHAQKALEAGVDGLILVAAGAGGHAG TTSPFALVGEVRKIFDGPIVLSGSIANGGSILAAQAMGADFAYMGTRFIATQEAHAIDDYKHAILNAKSSDIIYTNLFTG VHGNYIRESIEKAGLDPDALPESDKTKMNFGSDKTKAWKDIWGAGQGVGLMDDLPSVGTLVERLKREYDDAKARLGIPR
Sequences:
>Translated_319_residues MALPTVLQNLTLPVIASPMFIVSYPELVLAQCKAGIVGSFPALNARPAELLDAWLTQIQSELADHKAKHPDAVIGPIAVN QIVHQSNARLEHDVRVCVEHKVPIFITSLRAPAREIVDAVHSYGGIVLHDVINLRHAQKALEAGVDGLILVAAGAGGHAG TTSPFALVGEVRKIFDGPIVLSGSIANGGSILAAQAMGADFAYMGTRFIATQEAHAIDDYKHAILNAKSSDIIYTNLFTG VHGNYIRESIEKAGLDPDALPESDKTKMNFGSDKTKAWKDIWGAGQGVGLMDDLPSVGTLVERLKREYDDAKARLGIPR >Mature_318_residues ALPTVLQNLTLPVIASPMFIVSYPELVLAQCKAGIVGSFPALNARPAELLDAWLTQIQSELADHKAKHPDAVIGPIAVNQ IVHQSNARLEHDVRVCVEHKVPIFITSLRAPAREIVDAVHSYGGIVLHDVINLRHAQKALEAGVDGLILVAAGAGGHAGT TSPFALVGEVRKIFDGPIVLSGSIANGGSILAAQAMGADFAYMGTRFIATQEAHAIDDYKHAILNAKSSDIIYTNLFTGV HGNYIRESIEKAGLDPDALPESDKTKMNFGSDKTKAWKDIWGAGQGVGLMDDLPSVGTLVERLKREYDDAKARLGIPR
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 34087; Mature: 33955
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPTVLQNLTLPVIASPMFIVSYPELVLAQCKAGIVGSFPALNARPAELLDAWLTQIQS CCHHHHHHHCCHHHHHCCCCEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH ELADHKAKHPDAVIGPIAVNQIVHQSNARLEHDVRVCVEHKVPIFITSLRAPAREIVDAV HHHHHCCCCCCCEECHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH HSYGGIVLHDVINLRHAQKALEAGVDGLILVAAGAGGHAGTTSPFALVGEVRKIFDGPIV HHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEE LSGSIANGGSILAAQAMGADFAYMGTRFIATQEAHAIDDYKHAILNAKSSDIIYTNLFTG EECCCCCCCCEEEHHHCCCCHHHHCHHHEECCHHHHHHHHHHHHHCCCCCCEEEEEHHHC VHGNYIRESIEKAGLDPDALPESDKTKMNFGSDKTKAWKDIWGAGQGVGLMDDLPSVGTL CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCHHHHH VERLKREYDDAKARLGIPR HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ALPTVLQNLTLPVIASPMFIVSYPELVLAQCKAGIVGSFPALNARPAELLDAWLTQIQS CHHHHHHHCCHHHHHCCCCEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH ELADHKAKHPDAVIGPIAVNQIVHQSNARLEHDVRVCVEHKVPIFITSLRAPAREIVDAV HHHHHCCCCCCCEECHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH HSYGGIVLHDVINLRHAQKALEAGVDGLILVAAGAGGHAGTTSPFALVGEVRKIFDGPIV HHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEE LSGSIANGGSILAAQAMGADFAYMGTRFIATQEAHAIDDYKHAILNAKSSDIIYTNLFTG EECCCCCCCCEEEHHHCCCCHHHHCHHHEECCHHHHHHHHHHHHHCCCCCCEEEEEHHHC VHGNYIRESIEKAGLDPDALPESDKTKMNFGSDKTKAWKDIWGAGQGVGLMDDLPSVGTL CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCHHHHH VERLKREYDDAKARLGIPR HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA