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The map label for this gene is ychJ [C]

Identifier: 116690947

GI number: 116690947

Start: 3237800

End: 3238234

Strand: Direct

Name: ychJ [C]

Synonym: Bcen2424_2929

Alternate gene names: 116690947

Gene position: 3237800-3238234 (Clockwise)

Preceding gene: 116690946

Following gene: 116690948

Centisome position: 92.94

GC content: 71.95

Gene sequence:

>435_bases
ATGATTTTGACCCGACCTGACGCGTGCCCGTGCGGCGGCGCGTCTCCCCCGCCCGCCAAGGCGGCGGCGCCGCGCTACGC
GGCCTGCTGCGGCCGCTTCATCGACGGCGGCGAAGCCGCCCCGACCGCACTCGAATTGATGCGTTCGCGGTACAGCGCGT
ACGTCCTCGGCGCCACCGATTACCTGCGCGCGACGTGGGCCGCGCGCACCTGCCCGCCCGATCTCGACACCGACCCCACC
GCGCCGGACGCGCCGCGCTGGCTGGGCCTCGCGGTCAAACGCCACGCGCCACTCGACGACCGGCACGCGGAGGTCGAATT
CGTGGCCCGCTACAAGGTCGGCGGCCGCGCCTACCGGCTGCACGAGACGAGCCGTTTCGAGCGCGACGAGCAGGGATTCT
GGCGCTATGTCGACGGCGAAGTAAGTGAACGCTGA

Upstream 100 bases:

>100_bases
CGTGTCCCAGGCGAACGGCCGGTTCTTCCAGTACGACGGCGTCGAGCTGAGCTGGTGAGTACGCCGGCCGGCAACCCAGC
GTTGTTAATTCACATTTCGC

Downstream 100 bases:

>100_bases
CAAATAGTTGCCATGTCAGACGCCGGGTTATTCCCGCATTGCACAACCTGATTTTGTCGGGCTACGATGGGCTCGAATTG
GTCATGTTGCATGGCAGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MILTRPDACPCGGASPPPAKAAAPRYAACCGRFIDGGEAAPTALELMRSRYSAYVLGATDYLRATWAARTCPPDLDTDPT
APDAPRWLGLAVKRHAPLDDRHAEVEFVARYKVGGRAYRLHETSRFERDEQGFWRYVDGEVSER

Sequences:

>Translated_144_residues
MILTRPDACPCGGASPPPAKAAAPRYAACCGRFIDGGEAAPTALELMRSRYSAYVLGATDYLRATWAARTCPPDLDTDPT
APDAPRWLGLAVKRHAPLDDRHAEVEFVARYKVGGRAYRLHETSRFERDEQGFWRYVDGEVSER
>Mature_144_residues
MILTRPDACPCGGASPPPAKAAAPRYAACCGRFIDGGEAAPTALELMRSRYSAYVLGATDYLRATWAARTCPPDLDTDPT
APDAPRWLGLAVKRHAPLDDRHAEVEFVARYKVGGRAYRLHETSRFERDEQGFWRYVDGEVSER

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=133, Percent_Identity=39.0977443609023, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023006 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15914; Mature: 15914

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTRPDACPCGGASPPPAKAAAPRYAACCGRFIDGGEAAPTALELMRSRYSAYVLGATD
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCEEEECCHH
YLRATWAARTCPPDLDTDPTAPDAPRWLGLAVKRHAPLDDRHAEVEFVARYKVGGRAYRL
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCEEEEE
HETSRFERDEQGFWRYVDGEVSER
CCCHHCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MILTRPDACPCGGASPPPAKAAAPRYAACCGRFIDGGEAAPTALELMRSRYSAYVLGATD
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCEEEECCHH
YLRATWAARTCPPDLDTDPTAPDAPRWLGLAVKRHAPLDDRHAEVEFVARYKVGGRAYRL
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCEEEEE
HETSRFERDEQGFWRYVDGEVSER
CCCHHCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA