| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is actP [H]
Identifier: 116690894
GI number: 116690894
Start: 3175237
End: 3176922
Strand: Reverse
Name: actP [H]
Synonym: Bcen2424_2874
Alternate gene names: 116690894
Gene position: 3176922-3175237 (Counterclockwise)
Preceding gene: 116690895
Following gene: 116690893
Centisome position: 91.19
GC content: 68.21
Gene sequence:
>1686_bases ATGCGACGCATTTCGCGCGCGCTCGGCGCGCTGACCGTTCTCGTTTCCTCCACCGCCCATGCCACCGGCATCGCCGGCCC GATGCCCGACAAGGTCGAGCTGAACCCGGTCGCGATCGGGATGTTCTTCGCGTTCGTGTTCGCGACGCTCGCGCTCACAC GCTGGGCCGCGCGCCGCACGCGCTCGACGCGCGACTTCTACACGGCCGGCGGCGGCATCACCGGGCTGCAGAACGGGCTC GCGATCGCGGGCGACTACATGTCGGCCGCATCGTTCCTCGGGCTGTCCGGGATGGTGTTCATGTTCGGCTTCGACGGGCT GATCTACTCGATCGGCTTCCTGGTCGGCTGGCCGTTCGTGATGTTCCTGATCGCCGAACCGCTGCGCAACCTCGGCAAGT TCACGTTCGTCGACGTCGTCGCGTACCGCTTCGCGCAGCGGCCGATCCGGCTGCTGACCTCGGCGAACGCGCTGACCATC GTCGTGCTGTACCTCGTCGTGCAGATGGTCGGCGCCGGCAAGCTGATCCAGTTGCTGTTCGGACTGTCGTACGGCACGGC CGAGCTGATCGTCGGCGTGCTGATGGTCGTCTACGTGTTCTTCGGCGGGATGACCGCGACCACGTGGGTGCAGGTGATCA AGGCCGTGCTGCTGCTGTGCGGCGCGACGCTGCTCGCGTGGCTCGCGCTCGGCGAATTCGGCTTCAGCGTCGACACGATG TTCCGCCGCGCGGTGGCCGTGCATCCGGGCGCGCTGTCGATCATGGGGCCCGGCAAGCTGATCCGCGACCCGGCCAACGC GCTGTCGCTCGGCATCGCGCTGATGTTCGGCACGGCCGGCTTCCCGCACATCCTGATGCGCTTCTTCACGGTGCCGAACG CGAAGGAGGCGCGCAAGTCGGTGCTCTACGCGACGGGCTTCATCGGCTACTTCTACCTGCTGACCTTCGTGATCGGCTTT TCGGCGATCGTGCTGCTCGCGCAGCATCCGGAATTCTTCCGGCTCGGCGCGAACGGCACGTTCAACCTGACGCACGACCT GCTCGGCGGCTCCAACATGGTCGCGGTGAAGCTCGCGCAGGCAGTGGGCGGCAACTGGTTCTACGGGTTCATCGCGGCCG TCACGTTCGCAACGATCCTCGCGGTGGTCGCCGGGCTTACGCTCGCCGGCGCGACGACGATTTCGCACGACCTGTATGCG CAGATGTGGGCGCGCGGCAAGCCCGACGAACGGCTCGAGATGCGCATCTCGCGCGCGGCGACGATCGGGCTGTCGGCCGT CGCGATCGCGCTGTCGATCCTGTTCGAGCACGTGAACGTCGCGTTCATGGTCGGGCTCGTCGCGGCGGTGGCGGCGAGCG CCAATTTCCCGGTGCTCGCGATGTCGATCTTCTGGCGCGGGATGACCACGCGCGGCGCGGTGCTCGGCGGCGGTCTCGGC CTCGTGTCGGCGGTTGCGCTCACGGTGTTGTCGAAGTCGGTGTGGGTCGACGTGCTGCATCACGCCCACGCGGCGGTATT CCTCGACAACCCGGCGCTCGTGTCGGTGCCGCTCGCGTTCGTCGGGATCGTGGTCGGCTCGCTCGCGGATCGCGGCGAGC GCGCACGCCGCGAGCGCGACGCGTTCGCGCAGCAGGAGTTCTACGCGCAGACCGGCCTGCTGGCCGGCGAGGCCGTGCAG CACTGA
Upstream 100 bases:
>100_bases TGATCGCGATCGGCCTGACCGCGTGCTACGTGCTGCGCGCGAATCGTGCGTTCGACCGCCGCGTCGACGCGATCCTGCAA CGTTCGTGACGGAGGCCCGC
Downstream 100 bases:
>100_bases TTCCTCTGGTGAAACGACGCATCCGTCCGGATCGCCGGACGGATATTTTCCGGAAATCCGGAATCCCGGATTTTCTTGCC TGCCGCATTATGGGAAATAC
Product: acetate permease
Products: NA
Alternate protein names: Acetate permease; Acetate transporter ActP [H]
Number of amino acids: Translated: 561; Mature: 561
Protein sequence:
>561_residues MRRISRALGALTVLVSSTAHATGIAGPMPDKVELNPVAIGMFFAFVFATLALTRWAARRTRSTRDFYTAGGGITGLQNGL AIAGDYMSAASFLGLSGMVFMFGFDGLIYSIGFLVGWPFVMFLIAEPLRNLGKFTFVDVVAYRFAQRPIRLLTSANALTI VVLYLVVQMVGAGKLIQLLFGLSYGTAELIVGVLMVVYVFFGGMTATTWVQVIKAVLLLCGATLLAWLALGEFGFSVDTM FRRAVAVHPGALSIMGPGKLIRDPANALSLGIALMFGTAGFPHILMRFFTVPNAKEARKSVLYATGFIGYFYLLTFVIGF SAIVLLAQHPEFFRLGANGTFNLTHDLLGGSNMVAVKLAQAVGGNWFYGFIAAVTFATILAVVAGLTLAGATTISHDLYA QMWARGKPDERLEMRISRAATIGLSAVAIALSILFEHVNVAFMVGLVAAVAASANFPVLAMSIFWRGMTTRGAVLGGGLG LVSAVALTVLSKSVWVDVLHHAHAAVFLDNPALVSVPLAFVGIVVGSLADRGERARRERDAFAQQEFYAQTGLLAGEAVQ H
Sequences:
>Translated_561_residues MRRISRALGALTVLVSSTAHATGIAGPMPDKVELNPVAIGMFFAFVFATLALTRWAARRTRSTRDFYTAGGGITGLQNGL AIAGDYMSAASFLGLSGMVFMFGFDGLIYSIGFLVGWPFVMFLIAEPLRNLGKFTFVDVVAYRFAQRPIRLLTSANALTI VVLYLVVQMVGAGKLIQLLFGLSYGTAELIVGVLMVVYVFFGGMTATTWVQVIKAVLLLCGATLLAWLALGEFGFSVDTM FRRAVAVHPGALSIMGPGKLIRDPANALSLGIALMFGTAGFPHILMRFFTVPNAKEARKSVLYATGFIGYFYLLTFVIGF SAIVLLAQHPEFFRLGANGTFNLTHDLLGGSNMVAVKLAQAVGGNWFYGFIAAVTFATILAVVAGLTLAGATTISHDLYA QMWARGKPDERLEMRISRAATIGLSAVAIALSILFEHVNVAFMVGLVAAVAASANFPVLAMSIFWRGMTTRGAVLGGGLG LVSAVALTVLSKSVWVDVLHHAHAAVFLDNPALVSVPLAFVGIVVGSLADRGERARRERDAFAQQEFYAQTGLLAGEAVQ H >Mature_561_residues MRRISRALGALTVLVSSTAHATGIAGPMPDKVELNPVAIGMFFAFVFATLALTRWAARRTRSTRDFYTAGGGITGLQNGL AIAGDYMSAASFLGLSGMVFMFGFDGLIYSIGFLVGWPFVMFLIAEPLRNLGKFTFVDVVAYRFAQRPIRLLTSANALTI VVLYLVVQMVGAGKLIQLLFGLSYGTAELIVGVLMVVYVFFGGMTATTWVQVIKAVLLLCGATLLAWLALGEFGFSVDTM FRRAVAVHPGALSIMGPGKLIRDPANALSLGIALMFGTAGFPHILMRFFTVPNAKEARKSVLYATGFIGYFYLLTFVIGF SAIVLLAQHPEFFRLGANGTFNLTHDLLGGSNMVAVKLAQAVGGNWFYGFIAAVTFATILAVVAGLTLAGATTISHDLYA QMWARGKPDERLEMRISRAATIGLSAVAIALSILFEHVNVAFMVGLVAAVAASANFPVLAMSIFWRGMTTRGAVLGGGLG LVSAVALTVLSKSVWVDVLHHAHAAVFLDNPALVSVPLAFVGIVVGSLADRGERARRERDAFAQQEFYAQTGLLAGEAVQ H
Specific function: Transports acetate [H]
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Escherichia coli, GI1790503, Length=561, Percent_Identity=55.4367201426025, Blast_Score=599, Evalue=1e-172, Organism=Escherichia coli, GI1787251, Length=466, Percent_Identity=23.6051502145923, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87082237, Length=385, Percent_Identity=24.1558441558442, Blast_Score=66, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014083 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 59776; Mature: 59776
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRISRALGALTVLVSSTAHATGIAGPMPDKVELNPVAIGMFFAFVFATLALTRWAARRT CCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHH RSTRDFYTAGGGITGLQNGLAIAGDYMSAASFLGLSGMVFMFGFDGLIYSIGFLVGWPFV CCCCCCEECCCCCCHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFLIAEPLRNLGKFTFVDVVAYRFAQRPIRLLTSANALTIVVLYLVVQMVGAGKLIQLLF HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHH GLSYGTAELIVGVLMVVYVFFGGMTATTWVQVIKAVLLLCGATLLAWLALGEFGFSVDTM HCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH FRRAVAVHPGALSIMGPGKLIRDPANALSLGIALMFGTAGFPHILMRFFTVPNAKEARKS HHHHHHCCCCCEEECCCCHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHH VLYATGFIGYFYLLTFVIGFSAIVLLAQHPEFFRLGANGTFNLTHDLLGGSNMVAVKLAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEHHHHCCCCCHHHHHHHH AVGGNWFYGFIAAVTFATILAVVAGLTLAGATTISHDLYAQMWARGKPDERLEMRISRAA HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH TIGLSAVAIALSILFEHVNVAFMVGLVAAVAASANFPVLAMSIFWRGMTTRGAVLGGGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHCCHHH LVSAVALTVLSKSVWVDVLHHAHAAVFLDNPALVSVPLAFVGIVVGSLADRGERARRERD HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFAQQEFYAQTGLLAGEAVQH HHHHHHHHHHHCCCCCHHCCC >Mature Secondary Structure MRRISRALGALTVLVSSTAHATGIAGPMPDKVELNPVAIGMFFAFVFATLALTRWAARRT CCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHH RSTRDFYTAGGGITGLQNGLAIAGDYMSAASFLGLSGMVFMFGFDGLIYSIGFLVGWPFV CCCCCCEECCCCCCHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFLIAEPLRNLGKFTFVDVVAYRFAQRPIRLLTSANALTIVVLYLVVQMVGAGKLIQLLF HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHH GLSYGTAELIVGVLMVVYVFFGGMTATTWVQVIKAVLLLCGATLLAWLALGEFGFSVDTM HCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH FRRAVAVHPGALSIMGPGKLIRDPANALSLGIALMFGTAGFPHILMRFFTVPNAKEARKS HHHHHHCCCCCEEECCCCHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHH VLYATGFIGYFYLLTFVIGFSAIVLLAQHPEFFRLGANGTFNLTHDLLGGSNMVAVKLAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEHHHHCCCCCHHHHHHHH AVGGNWFYGFIAAVTFATILAVVAGLTLAGATTISHDLYAQMWARGKPDERLEMRISRAA HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH TIGLSAVAIALSILFEHVNVAFMVGLVAAVAASANFPVLAMSIFWRGMTTRGAVLGGGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHCCHHH LVSAVALTVLSKSVWVDVLHHAHAAVFLDNPALVSVPLAFVGIVVGSLADRGERARRERD HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFAQQEFYAQTGLLAGEAVQH HHHHHHHHHHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA