The gene/protein map for NC_008542 is currently unavailable.
Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116690889

Identifier: 116690889

GI number: 116690889

Start: 3168764

End: 3169366

Strand: Reverse

Name: 116690889

Synonym: Bcen2424_2869

Alternate gene names: NA

Gene position: 3169366-3168764 (Counterclockwise)

Preceding gene: 116690891

Following gene: 116690886

Centisome position: 90.97

GC content: 72.64

Gene sequence:

>603_bases
ATGGCCGTTTTGCCTGCCGCGATCCACGCCATGCCGAAGGAAGTCCCCGATTCGTTGCGCCCCCTTTTTCGCCCGCTGCG
ACACTTCGCCGCGCTGGCCTGCATGAGCGCCGCGCTGGCCGCGTGCTCGCCGTCGTACGACTGGCGCACGCTGCACAACG
ATGCCGGCTACACGATCGACCTGCCGGCGAAGCCGACCGTCGAGGAGCAGCCGGTGGCGCTCGGCGGCACGTCGATGCCG
ATGCGGATGCAGGCCGCGCACGTCGACGGCGCGGTGTTCGCGGTCGGCACGCTGACGCTGCCGGACGACCGCGACGACAC
GCGCCGCACGGCACTCGACTTCCTGCGCGCGGGGCTGTCGCGCAACCTCGAAGGCGCGCCGCAGACGGCCGCGGTGCCCG
TGCCGCTCGCGGCCGGCGGCGCGGTGAACGGGCTCGAACTGCGTATCGCGGGGGCCGCCGCCGGCGGCGATCGCGCGCGC
AAGACGATCGTCGCGCGGCTTGCCGCGCGCGGCCGGCACGCATACCAGGCCGTCGTGATCGCCGACGGGCCGCTCGCGCA
GGAGCAGCTGGACCAGTTTTTCGGCTCGTTCAAACTCGATTGA

Upstream 100 bases:

>100_bases
ATCGATGCAAAGGACGTCGAAATTCGGCGCTCATTTTAGCGCGAATGCGGCGTGTGCACCGGCGGCGGCCGCGCATCCCG
GTTTTCAGGTTCGGCGGATA

Downstream 100 bases:

>100_bases
CGACGGCCGGCGAGGGCGCTCTGACAGGCAACGGCAACTGAAAGTTCATTCGCAGCTTTCGACGCTAATCACCGGATTTT
GCGAGGGTTTTTCGGCTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MAVLPAAIHAMPKEVPDSLRPLFRPLRHFAALACMSAALAACSPSYDWRTLHNDAGYTIDLPAKPTVEEQPVALGGTSMP
MRMQAAHVDGAVFAVGTLTLPDDRDDTRRTALDFLRAGLSRNLEGAPQTAAVPVPLAAGGAVNGLELRIAGAAAGGDRAR
KTIVARLAARGRHAYQAVVIADGPLAQEQLDQFFGSFKLD

Sequences:

>Translated_200_residues
MAVLPAAIHAMPKEVPDSLRPLFRPLRHFAALACMSAALAACSPSYDWRTLHNDAGYTIDLPAKPTVEEQPVALGGTSMP
MRMQAAHVDGAVFAVGTLTLPDDRDDTRRTALDFLRAGLSRNLEGAPQTAAVPVPLAAGGAVNGLELRIAGAAAGGDRAR
KTIVARLAARGRHAYQAVVIADGPLAQEQLDQFFGSFKLD
>Mature_199_residues
AVLPAAIHAMPKEVPDSLRPLFRPLRHFAALACMSAALAACSPSYDWRTLHNDAGYTIDLPAKPTVEEQPVALGGTSMPM
RMQAAHVDGAVFAVGTLTLPDDRDDTRRTALDFLRAGLSRNLEGAPQTAAVPVPLAAGGAVNGLELRIAGAAAGGDRARK
TIVARLAARGRHAYQAVVIADGPLAQEQLDQFFGSFKLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21075; Mature: 20944

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLPAAIHAMPKEVPDSLRPLFRPLRHFAALACMSAALAACSPSYDWRTLHNDAGYTID
CCCCCHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEE
LPAKPTVEEQPVALGGTSMPMRMQAAHVDGAVFAVGTLTLPDDRDDTRRTALDFLRAGLS
CCCCCCCCCCCEEECCCCCCCEEEHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHH
RNLEGAPQTAAVPVPLAAGGAVNGLELRIAGAAAGGDRARKTIVARLAARGRHAYQAVVI
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEE
ADGPLAQEQLDQFFGSFKLD
ECCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
AVLPAAIHAMPKEVPDSLRPLFRPLRHFAALACMSAALAACSPSYDWRTLHNDAGYTID
CCCCHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEE
LPAKPTVEEQPVALGGTSMPMRMQAAHVDGAVFAVGTLTLPDDRDDTRRTALDFLRAGLS
CCCCCCCCCCCEEECCCCCCCEEEHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHH
RNLEGAPQTAAVPVPLAAGGAVNGLELRIAGAAAGGDRARKTIVARLAARGRHAYQAVVI
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEE
ADGPLAQEQLDQFFGSFKLD
ECCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA