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The map label for this gene is ctpA [H]

Identifier: 116690878

GI number: 116690878

Start: 3156084

End: 3157631

Strand: Direct

Name: ctpA [H]

Synonym: Bcen2424_2858

Alternate gene names: 116690878

Gene position: 3156084-3157631 (Clockwise)

Preceding gene: 116690877

Following gene: 116690879

Centisome position: 90.59

GC content: 65.44

Gene sequence:

>1548_bases
ATGCGAATGAATTTGAAGAACATCGGCCTGATTGCCGCGGGCCTCGCCACGGGCGTGTTCGCCACGCTGCAGGTTTCCGC
ATCGGCCGAGCAGACCGCCACGGCGCCGCTTCCCCTCGACCAGCTCCGCCTGTTCGCGGAAGTATTCGGGCAGATCAAGC
GCGAGTACGTCGAACCGGTCGACGACAAGAAGCTGCTGACGGCGGCGATCAAGGGCATGGTGTCGAGCCTCGATCCGCAC
TCGTCGTTCCTCGACAAGACCGACTATGACGAGCTGCAGGAGCAGACGAAGGGCCGCTTCGCGGGCCTCGGCATCGAGAT
CTCGCAGGAAGACGGCCTCGTCAAGGTGATCTCGCCGATCGAGGATACCCCCGCGTTCCGCGCCGGCATCCGTCCGGGCG
ACCTGATCACGCGCATCAACGACAAGCCGGTGCGCGGCATGACGCTCGACAAGGCCGTCAAGCAGATGCGCGGCGAGCCG
GGCACCAAGGTCACGCTGACGATCTTCCGCAAGAGCGACGACCGCACGTTCCCGGTCACGGTCACGCGCGCGATCATCAA
GGTCCAGAGCGTGAAGATGAAGATGCTCGATCCGGGCTATGCGTATGTCCGCATCACGAGCTTCCAGGAGCGCACGACGC
CCGATCTCGCGCAGAAGCTGCAGGACATCGCGCGCCAGCAGCCGAACCTGAAGGGCCTCATCCTCGACCTGCGCAACAAC
GGCGGCGGCCTGCTGCAGAGCGCGGTCGGCGTGGCCGGCGCGTTCCTGCCGCCCGACTCGGTCGTCGTGTCGACCAACGG
CCAGATCCCCGATTCGAAGCAGGTCTACCGCGATACGTACGACAACTATCGCCTGCCGTCCTTCGACGGCGATCCGCTGA
AGAACCTGCCGCCGGTCTTCAAGACCGTGCCGATGATCGTGCTGACGAACGCGTATTCGGCGTCCGCGTCGGAAATCGTC
GCCGGTGCGCTGCAGGATTCGAAGCGCGCGCAGATCATGGGCAAGACGACGTTCGGCAAGGGTTCGGTGCAGACGGTCCG
CCCGATGACGGCCGACACCGCGCTGCGCCTGACCACCGCGTACTACTACACGCCGAGCGGCCGTTCGATCCAGAACAAGG
GCATCACGCCCGACGTGCCGGTCGATCAGTACGCGGACGGCGATCCGGACGACGTGCTCGTGACGCGCGAGGTCGACTAC
ACGAACCACCTCGCGAACACGCAGGATCCGAACGAGAAGAAGGAACAGGAAGAGCGCGAGCAGCGCCGGATGGATCAGCT
GCGCGTTCTCGAAGAGCAGAACGACAAGAAGACGCCGGAGCAGCGCCAGAAGGATCGCGATCGCAAGCCGATCGAGTTCG
GCAGCGCCGACGACTTCATGATGCAGCAGGCGCTCAACAAGCTCGAAGGCAAGCCGGTCCAGGAATCGAAGTCGCTGCTC
GCCGAGAGCACGGCGAAGAGCCCGGCCGCCAAGGCGGCCGCGAAGGCATCGGGCGCCAGCGCCGCGAAGCCGGCTTCCGC
ACCGAAGCCGGCGTCCGCGCCGAAGTAA

Upstream 100 bases:

>100_bases
CGCTTTTCGCGCCGTTCCACTGAGTTATCGGACGAACAGTTATACTTGTCCGCTACATCCCCGCTACCGCCACGCGCTTC
CCGACCGCACCAGACTCTCT

Downstream 100 bases:

>100_bases
GCGCCAGCCGGCATCCAACGGGCCATCGCGGGAAGACCGCGATGGCCCGTTTTTCATGCGCGCCTAAAATAACGAACGTC
CGCCCGCCTCGCTCACGCCC

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MRMNLKNIGLIAAGLATGVFATLQVSASAEQTATAPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSLDPH
SSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEP
GTKVTLTIFRKSDDRTFPVTVTRAIIKVQSVKMKMLDPGYAYVRITSFQERTTPDLAQKLQDIARQQPNLKGLILDLRNN
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDTYDNYRLPSFDGDPLKNLPPVFKTVPMIVLTNAYSASASEIV
AGALQDSKRAQIMGKTTFGKGSVQTVRPMTADTALRLTTAYYYTPSGRSIQNKGITPDVPVDQYADGDPDDVLVTREVDY
TNHLANTQDPNEKKEQEEREQRRMDQLRVLEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSLL
AESTAKSPAAKAAAKASGASAAKPASAPKPASAPK

Sequences:

>Translated_515_residues
MRMNLKNIGLIAAGLATGVFATLQVSASAEQTATAPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSLDPH
SSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEP
GTKVTLTIFRKSDDRTFPVTVTRAIIKVQSVKMKMLDPGYAYVRITSFQERTTPDLAQKLQDIARQQPNLKGLILDLRNN
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDTYDNYRLPSFDGDPLKNLPPVFKTVPMIVLTNAYSASASEIV
AGALQDSKRAQIMGKTTFGKGSVQTVRPMTADTALRLTTAYYYTPSGRSIQNKGITPDVPVDQYADGDPDDVLVTREVDY
TNHLANTQDPNEKKEQEEREQRRMDQLRVLEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSLL
AESTAKSPAAKAAAKASGASAAKPASAPKPASAPK
>Mature_515_residues
MRMNLKNIGLIAAGLATGVFATLQVSASAEQTATAPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSLDPH
SSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEP
GTKVTLTIFRKSDDRTFPVTVTRAIIKVQSVKMKMLDPGYAYVRITSFQERTTPDLAQKLQDIARQQPNLKGLILDLRNN
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDTYDNYRLPSFDGDPLKNLPPVFKTVPMIVLTNAYSASASEIV
AGALQDSKRAQIMGKTTFGKGSVQTVRPMTADTALRLTTAYYYTPSGRSIQNKGITPDVPVDQYADGDPDDVLVTREVDY
TNHLANTQDPNEKKEQEEREQRRMDQLRVLEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSLL
AESTAKSPAAKAAAKASGASAAKPASAPKPASAPK

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=339, Percent_Identity=31.5634218289086, Blast_Score=133, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 56312; Mature: 56312

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMNLKNIGLIAAGLATGVFATLQVSASAEQTATAPLPLDQLRLFAEVFGQIKREYVEPV
CCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DDKKLLTAAIKGMVSSLDPHSSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPI
CCHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHCCCEEECCEEECCCCCEEEEECCC
EDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEPGTKVTLTIFRKSDDRTFPVT
CCCCHHHCCCCCCHHEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHH
VTRAIIKVQSVKMKMLDPGYAYVRITSFQERTTPDLAQKLQDIARQQPNLKGLILDLRNN
HHHHHHHHHHHHHEEECCCEEEEEEECCHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECC
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDTYDNYRLPSFDGDPLKNLPPVF
CCHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
KTVPMIVLTNAYSASASEIVAGALQDSKRAQIMGKTTFGKGSVQTVRPMTADTALRLTTA
HHCCHHEEECCCCCCHHHHHHHHHCCCCHHEEEEECCCCCCCCCEECCCCCCCEEEEEEE
YYYTPSGRSIQNKGITPDVPVDQYADGDPDDVLVTREVDYTNHLANTQDPNEKKEQEERE
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCHHHHHHHHH
QRRMDQLRVLEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSLL
HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
AESTAKSPAAKAAAKASGASAAKPASAPKPASAPK
HHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRMNLKNIGLIAAGLATGVFATLQVSASAEQTATAPLPLDQLRLFAEVFGQIKREYVEPV
CCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DDKKLLTAAIKGMVSSLDPHSSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPI
CCHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHCCCEEECCEEECCCCCEEEEECCC
EDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEPGTKVTLTIFRKSDDRTFPVT
CCCCHHHCCCCCCHHEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHH
VTRAIIKVQSVKMKMLDPGYAYVRITSFQERTTPDLAQKLQDIARQQPNLKGLILDLRNN
HHHHHHHHHHHHHEEECCCEEEEEEECCHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECC
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDTYDNYRLPSFDGDPLKNLPPVF
CCHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
KTVPMIVLTNAYSASASEIVAGALQDSKRAQIMGKTTFGKGSVQTVRPMTADTALRLTTA
HHCCHHEEECCCCCCHHHHHHHHHCCCCHHEEEEECCCCCCCCCEECCCCCCCEEEEEEE
YYYTPSGRSIQNKGITPDVPVDQYADGDPDDVLVTREVDYTNHLANTQDPNEKKEQEERE
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCHHHHHHHHH
QRRMDQLRVLEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSLL
HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
AESTAKSPAAKAAAKASGASAAKPASAPKPASAPK
HHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]