| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is gpmA [H]
Identifier: 116690877
GI number: 116690877
Start: 3155015
End: 3155827
Strand: Direct
Name: gpmA [H]
Synonym: Bcen2424_2857
Alternate gene names: 116690877
Gene position: 3155015-3155827 (Clockwise)
Preceding gene: 116690871
Following gene: 116690878
Centisome position: 90.56
GC content: 67.28
Gene sequence:
>813_bases ATGTCGGGCCCCGGTTCGGTCCCGTGCGGCGCGCCCCGCTTCCCATCACTACCGACCGCAAGATCCATGTACAAACTCGT TCTCATCCGCCACGGCGAATCGACGTGGAACAAGGAAAACCGCTTCACCGGCTGGGTCGACGTCGACCTGACCGAACAGG GTCGCAACGAGGCCTACCAGGCCGGCGAACTGCTCAAGGAGGCCGGCTACACGTTCGACATCGCGTACACGTCGGTGCTC AAGCGCGCGATCCGCACGCTGTGGCACGTGCAGGACAAGATGGACCTGATGTACCTGCCGGTCGTCCACTCGTGGCGCCT GAACGAGCGCCACTACGGCGCGCTGTCGGGCCTGAACAAGGCGGAAACGGCCGCGAAGTTCGGCGACGAGCAGGTGCTCG TGTGGCGCCGCAGCTACGACACACCGCCGCCCGCGCTCGAGCCGACCGACGAGCGCGCGCCGTTCAACGACCCGCGCTAC GCGAAGGTGCCGCGCGAGCAACTGCCGCTCACCGAGTGCCTGAAGGACACGGTCGCGCGCGTGCTGCCGCTGTGGAACGA GTCGATCGCGCCGGCGGTGCGCGCCGGCAAGCAGGTGCTGATCGCCGCGCACGGCAACTCGCTGCGCGCGCTGATCAAGT ACCTCGACGGCATCTCGGACAGCGACATCGTCGGCCTGAACATCCCGAACGGCGTGCCGCTCGTGTATGAGCTCGACGAG AACCTGAAGCCGATCAAGCACTATTACCTCGGCGACCAGGACGCGATCGCGCAGGCGCAGGCCGCCGTCGCGAAGCAGGG CAAGGCGGGCTGA
Upstream 100 bases:
>100_bases CCAGGTTCGTGTAATTGGTAAAGAACGTCACGGAATGCCGCCGGAAAAAGAGAAATCGGATGAGGACAATCCCGCCATTA TAAAATAACCGTCTTGCGCG
Downstream 100 bases:
>100_bases TGCCCGGCGCGGCGAGCAGGCCGCGTTCCGGCGCGGCGTGCCGGGCCCCGGCCCGCACGCCGCGCGAACCTTCCCGGCCC CGCTGCGGTCGAACCCGCTT
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSGPGSVPCGAPRFPSLPTARSMYKLVLIRHGESTWNKENRFTGWVDVDLTEQGRNEAYQAGELLKEAGYTFDIAYTSVL KRAIRTLWHVQDKMDLMYLPVVHSWRLNERHYGALSGLNKAETAAKFGDEQVLVWRRSYDTPPPALEPTDERAPFNDPRY AKVPREQLPLTECLKDTVARVLPLWNESIAPAVRAGKQVLIAAHGNSLRALIKYLDGISDSDIVGLNIPNGVPLVYELDE NLKPIKHYYLGDQDAIAQAQAAVAKQGKAG
Sequences:
>Translated_270_residues MSGPGSVPCGAPRFPSLPTARSMYKLVLIRHGESTWNKENRFTGWVDVDLTEQGRNEAYQAGELLKEAGYTFDIAYTSVL KRAIRTLWHVQDKMDLMYLPVVHSWRLNERHYGALSGLNKAETAAKFGDEQVLVWRRSYDTPPPALEPTDERAPFNDPRY AKVPREQLPLTECLKDTVARVLPLWNESIAPAVRAGKQVLIAAHGNSLRALIKYLDGISDSDIVGLNIPNGVPLVYELDE NLKPIKHYYLGDQDAIAQAQAAVAKQGKAG >Mature_269_residues SGPGSVPCGAPRFPSLPTARSMYKLVLIRHGESTWNKENRFTGWVDVDLTEQGRNEAYQAGELLKEAGYTFDIAYTSVLK RAIRTLWHVQDKMDLMYLPVVHSWRLNERHYGALSGLNKAETAAKFGDEQVLVWRRSYDTPPPALEPTDERAPFNDPRYA KVPREQLPLTECLKDTVARVLPLWNESIAPAVRAGKQVLIAAHGNSLRALIKYLDGISDSDIVGLNIPNGVPLVYELDEN LKPIKHYYLGDQDAIAQAQAAVAKQGKAG
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI50593010, Length=254, Percent_Identity=57.4803149606299, Blast_Score=310, Evalue=8e-85, Organism=Homo sapiens, GI4505753, Length=249, Percent_Identity=61.0441767068273, Blast_Score=303, Evalue=1e-82, Organism=Homo sapiens, GI71274132, Length=251, Percent_Identity=58.9641434262948, Blast_Score=289, Evalue=2e-78, Organism=Homo sapiens, GI4502445, Length=256, Percent_Identity=51.5625, Blast_Score=267, Evalue=7e-72, Organism=Homo sapiens, GI40353764, Length=256, Percent_Identity=51.5625, Blast_Score=267, Evalue=7e-72, Organism=Homo sapiens, GI310129614, Length=162, Percent_Identity=62.962962962963, Blast_Score=197, Evalue=1e-50, Organism=Escherichia coli, GI1786970, Length=248, Percent_Identity=65.7258064516129, Blast_Score=335, Evalue=3e-93, Organism=Saccharomyces cerevisiae, GI6322697, Length=249, Percent_Identity=55.421686746988, Blast_Score=252, Evalue=5e-68, Organism=Saccharomyces cerevisiae, GI6324516, Length=293, Percent_Identity=32.7645051194539, Blast_Score=154, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6320183, Length=298, Percent_Identity=32.2147651006711, Blast_Score=144, Evalue=1e-35, Organism=Drosophila melanogaster, GI24646216, Length=253, Percent_Identity=52.1739130434783, Blast_Score=275, Evalue=3e-74, Organism=Drosophila melanogaster, GI85725270, Length=250, Percent_Identity=52.8, Blast_Score=263, Evalue=8e-71, Organism=Drosophila melanogaster, GI85725272, Length=250, Percent_Identity=52.8, Blast_Score=263, Evalue=8e-71, Organism=Drosophila melanogaster, GI24650981, Length=250, Percent_Identity=52.8, Blast_Score=263, Evalue=8e-71, Organism=Drosophila melanogaster, GI28571815, Length=251, Percent_Identity=41.4342629482072, Blast_Score=184, Evalue=6e-47, Organism=Drosophila melanogaster, GI28571817, Length=251, Percent_Identity=41.4342629482072, Blast_Score=184, Evalue=7e-47, Organism=Drosophila melanogaster, GI24648979, Length=251, Percent_Identity=41.4342629482072, Blast_Score=183, Evalue=9e-47,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 30080; Mature: 29948
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPGSVPCGAPRFPSLPTARSMYKLVLIRHGESTWNKENRFTGWVDVDLTEQGRNEAYQ CCCCCCCCCCCCCCCCCCCHHHHHEEHEEECCCCCCCCCCCEEEEEEEEECCCCCHHHHH AGELLKEAGYTFDIAYTSVLKRAIRTLWHVQDKMDLMYLPVVHSWRLNERHYGALSGLNK HHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHHCEECCCCHHHHHHCCCH AETAAKFGDEQVLVWRRSYDTPPPALEPTDERAPFNDPRYAKVPREQLPLTECLKDTVAR HHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHH VLPLWNESIAPAVRAGKQVLIAAHGNSLRALIKYLDGISDSDIVGLNIPNGVPLVYELDE HHHHCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCC NLKPIKHYYLGDQDAIAQAQAAVAKQGKAG CCCHHHHHHCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SGPGSVPCGAPRFPSLPTARSMYKLVLIRHGESTWNKENRFTGWVDVDLTEQGRNEAYQ CCCCCCCCCCCCCCCCCCHHHHHEEHEEECCCCCCCCCCCEEEEEEEEECCCCCHHHHH AGELLKEAGYTFDIAYTSVLKRAIRTLWHVQDKMDLMYLPVVHSWRLNERHYGALSGLNK HHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHHCEECCCCHHHHHHCCCH AETAAKFGDEQVLVWRRSYDTPPPALEPTDERAPFNDPRYAKVPREQLPLTECLKDTVAR HHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHH VLPLWNESIAPAVRAGKQVLIAAHGNSLRALIKYLDGISDSDIVGLNIPNGVPLVYELDE HHHHCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCC NLKPIKHYYLGDQDAIAQAQAAVAKQGKAG CCCHHHHHHCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA