| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is bmr3 [H]
Identifier: 116690765
GI number: 116690765
Start: 3041906
End: 3043501
Strand: Reverse
Name: bmr3 [H]
Synonym: Bcen2424_2745
Alternate gene names: 116690765
Gene position: 3043501-3041906 (Counterclockwise)
Preceding gene: 116690767
Following gene: 116690764
Centisome position: 87.36
GC content: 67.98
Gene sequence:
>1596_bases ATGGCCGTTCATACCGCCGCCCACCATTCGAGCGGGCAAGTCCTGCCGTTCCGCGAATCGCTGCTCGCGATGATCGGGAT CTCGTTCGTCACCATGCTGGTCGCGCTGGACCAGACGGTCGTCGGCACCGCGCTGCCGACCATCGTCGCCGAACTCCGCG GCTTCGACCTGTACGCGTGGGTCGCGACCTCGTACCTGCTCAGTTCCGTGATCACGGTGCCGATCTTCGGCCGGCTCGGC GACTATTACGGCCGCAAGCCGTTCGTGATCGCGTCGATCGTCGTGTTTACCGGCGCGTCGGTGCTGTGCGGGATGGCCAA CGACATGCTGTATCTCGTGCTCGCGCGCGGGCTGCAGGGAATCGGCGGCGGGATGCTGGTCGGCACCGCGTTCGCGTGCA TTCCCGATCTGTTTCCCGATTCCGTCGTGCGGCTGCGCTGGCAGGTGCTGATGAGCTCGGCGTTCGGTATCGCGAACGCG GTCGGCCCGTCGCTCGGCGGCGTGCTGACCCAGTCGTTCGGCTGGCGCTCGGTGTTCTATGTGAACCTGCCGATCGGCAT CCTGTCGCTGTTCTTCGTGTGGCGCTACCTGCCGCACCTGCGCCACGTCGAGCACGACCGCAAGATGCGGCTCGACTGGC CGGGCGCGCTGTTGATCGCGCTGTCGCTCGGTGCGCTGCAACTGTTCGTCGAATGGCTGCCGAAGTACGGCGTCGCGAGC TGGGCGTCGCTGCTGCTCGTCGTCGCGGTCGCGGCGGGCATCGGCCTGTGGCACTGGGAAAAGCGCTGCGCGCAGCCGAT TCTGCCGTTCGACATGTTCGGCAACCGCGCGCTGTCGGCCCTCTTCGTGCTCGCGATCCTCGCCGGTTTCTCGATGTTCT CGCTCCTGTTCTACGCGCCGTTGCTGTTCCAGGGCGGCTTCGGGATGTCGCCGAGAGAGGCCGGGCTCGTGATCACGCCG CTCGTCGTGTTCATCACGATCGGCAGCATCATGAACGGCCGCGTCGTCACGCGCATTCGCCATCCGAACACGATGCTGCA CGTCGGCTTCGTGCTGTTCGCCATCGCGTGCGCGGGCGTCGTCGTGTCGACCCACACGACGCCGACCTGGATGCTGATGG CGCTGATGGTCGCGGGCGGCATCGGGCTCGGCTTCGTGCTGCCGAACCTCACCGTGTTCGCGCAGCAGACGGCCGGCCGC GAGCATCTCGGCATCGCCACGGCGCTGTTGCAGTCGCTGCGGATGGTCGGCGGGATGCTCGGCACCGCGCTCACCGGCAC GCTCGTCAACCAGATGTATTCGGGCGGCGTGCGCGACGCGCTGTCGGGCGACCACGCGATGCAGTGGCACGCGCGGCTCG CCGATCCGCAGATCCTGATCGATCGCGCGGCGCAGGGCGGTCTCGTCGCGGAGTTGACGCGTGCCGGGCATAATGGCGCG CTGCTGCTGGAAGCGGCCCGCGAATCGCTGGTCGGCGCGATTCACCTGGGTGTCGCGATGGCGGCCGTCGTCGCCGTGGT GTCGGTGTGGCAGTGCCGTCGCGTGCCGCCGATCGCGCTGCGGCGCAAGATCGAACCGCACGTCGCGGCCGATTGA
Upstream 100 bases:
>100_bases CTTGGCCTGAACAGGCCCTGAACCTATCGTCAGCCTAGATTACTCCGGCATGCTAGAATTTTGAGATTATTTGACCCGGC AAAAGTTGCATCGACAAAAA
Downstream 100 bases:
>100_bases CCGATCGGGCGAGCGATTCGACGACTCAACGATTCACCGGAACGAAATCAGCGCATGGAAGAACAGGACCGCGTCGCGAT CTTGCAGCAATTCGGACGCA
Product: major facilitator transporter
Products: NA
Alternate protein names: Multidrug-efflux transporter 3 [H]
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MAVHTAAHHSSGQVLPFRESLLAMIGISFVTMLVALDQTVVGTALPTIVAELRGFDLYAWVATSYLLSSVITVPIFGRLG DYYGRKPFVIASIVVFTGASVLCGMANDMLYLVLARGLQGIGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANA VGPSLGGVLTQSFGWRSVFYVNLPIGILSLFFVWRYLPHLRHVEHDRKMRLDWPGALLIALSLGALQLFVEWLPKYGVAS WASLLLVVAVAAGIGLWHWEKRCAQPILPFDMFGNRALSALFVLAILAGFSMFSLLFYAPLLFQGGFGMSPREAGLVITP LVVFITIGSIMNGRVVTRIRHPNTMLHVGFVLFAIACAGVVVSTHTTPTWMLMALMVAGGIGLGFVLPNLTVFAQQTAGR EHLGIATALLQSLRMVGGMLGTALTGTLVNQMYSGGVRDALSGDHAMQWHARLADPQILIDRAAQGGLVAELTRAGHNGA LLLEAARESLVGAIHLGVAMAAVVAVVSVWQCRRVPPIALRRKIEPHVAAD
Sequences:
>Translated_531_residues MAVHTAAHHSSGQVLPFRESLLAMIGISFVTMLVALDQTVVGTALPTIVAELRGFDLYAWVATSYLLSSVITVPIFGRLG DYYGRKPFVIASIVVFTGASVLCGMANDMLYLVLARGLQGIGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANA VGPSLGGVLTQSFGWRSVFYVNLPIGILSLFFVWRYLPHLRHVEHDRKMRLDWPGALLIALSLGALQLFVEWLPKYGVAS WASLLLVVAVAAGIGLWHWEKRCAQPILPFDMFGNRALSALFVLAILAGFSMFSLLFYAPLLFQGGFGMSPREAGLVITP LVVFITIGSIMNGRVVTRIRHPNTMLHVGFVLFAIACAGVVVSTHTTPTWMLMALMVAGGIGLGFVLPNLTVFAQQTAGR EHLGIATALLQSLRMVGGMLGTALTGTLVNQMYSGGVRDALSGDHAMQWHARLADPQILIDRAAQGGLVAELTRAGHNGA LLLEAARESLVGAIHLGVAMAAVVAVVSVWQCRRVPPIALRRKIEPHVAAD >Mature_530_residues AVHTAAHHSSGQVLPFRESLLAMIGISFVTMLVALDQTVVGTALPTIVAELRGFDLYAWVATSYLLSSVITVPIFGRLGD YYGRKPFVIASIVVFTGASVLCGMANDMLYLVLARGLQGIGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANAV GPSLGGVLTQSFGWRSVFYVNLPIGILSLFFVWRYLPHLRHVEHDRKMRLDWPGALLIALSLGALQLFVEWLPKYGVASW ASLLLVVAVAAGIGLWHWEKRCAQPILPFDMFGNRALSALFVLAILAGFSMFSLLFYAPLLFQGGFGMSPREAGLVITPL VVFITIGSIMNGRVVTRIRHPNTMLHVGFVLFAIACAGVVVSTHTTPTWMLMALMVAGGIGLGFVLPNLTVFAQQTAGRE HLGIATALLQSLRMVGGMLGTALTGTLVNQMYSGGVRDALSGDHAMQWHARLADPQILIDRAAQGGLVAELTRAGHNGAL LLEAARESLVGAIHLGVAMAAVVAVVSVWQCRRVPPIALRRKIEPHVAAD
Specific function: Confers resistance to puromycin, tosufloxacin and norfloxacin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=444, Percent_Identity=27.7027027027027, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1790195, Length=342, Percent_Identity=28.9473684210526, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1788710, Length=516, Percent_Identity=25.1937984496124, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1789042, Length=418, Percent_Identity=25.1196172248804, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI1788392, Length=320, Percent_Identity=27.5, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1790146, Length=170, Percent_Identity=32.3529411764706, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6319770, Length=451, Percent_Identity=24.1685144124169, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6322958, Length=489, Percent_Identity=24.1308793456033, Blast_Score=97, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6323735, Length=485, Percent_Identity=22.0618556701031, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6321663, Length=150, Percent_Identity=34.6666666666667, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6325455, Length=154, Percent_Identity=32.4675324675325, Blast_Score=77, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6324954, Length=404, Percent_Identity=22.7722772277228, Blast_Score=67, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 56940; Mature: 56809
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVHTAAHHSSGQVLPFRESLLAMIGISFVTMLVALDQTVVGTALPTIVAELRGFDLYAW CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VATSYLLSSVITVPIFGRLGDYYGRKPFVIASIVVFTGASVLCGMANDMLYLVLARGLQG HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC IGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANAVGPSLGGVLTQSFGWRSVFY CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEE VNLPIGILSLFFVWRYLPHLRHVEHDRKMRLDWPGALLIALSLGALQLFVEWLPKYGVAS EECCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHH WASLLLVVAVAAGIGLWHWEKRCAQPILPFDMFGNRALSALFVLAILAGFSMFSLLFYAP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFQGGFGMSPREAGLVITPLVVFITIGSIMNGRVVTRIRHPNTMLHVGFVLFAIACAGV HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHH VVSTHTTPTWMLMALMVAGGIGLGFVLPNLTVFAQQTAGREHLGIATALLQSLRMVGGML HEECCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH GTALTGTLVNQMYSGGVRDALSGDHAMQWHARLADPQILIDRAAQGGLVAELTRAGHNGA HHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHCCCCCE LLLEAARESLVGAIHLGVAMAAVVAVVSVWQCRRVPPIALRRKIEPHVAAD EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCC >Mature Secondary Structure AVHTAAHHSSGQVLPFRESLLAMIGISFVTMLVALDQTVVGTALPTIVAELRGFDLYAW CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VATSYLLSSVITVPIFGRLGDYYGRKPFVIASIVVFTGASVLCGMANDMLYLVLARGLQG HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC IGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANAVGPSLGGVLTQSFGWRSVFY CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEE VNLPIGILSLFFVWRYLPHLRHVEHDRKMRLDWPGALLIALSLGALQLFVEWLPKYGVAS EECCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHH WASLLLVVAVAAGIGLWHWEKRCAQPILPFDMFGNRALSALFVLAILAGFSMFSLLFYAP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFQGGFGMSPREAGLVITPLVVFITIGSIMNGRVVTRIRHPNTMLHVGFVLFAIACAGV HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHH VVSTHTTPTWMLMALMVAGGIGLGFVLPNLTVFAQQTAGREHLGIATALLQSLRMVGGML HEECCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH GTALTGTLVNQMYSGGVRDALSGDHAMQWHARLADPQILIDRAAQGGLVAELTRAGHNGA HHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHCCCCCE LLLEAARESLVGAIHLGVAMAAVVAVVSVWQCRRVPPIALRRKIEPHVAAD EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9023234; 9384377 [H]