| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is marR [C]
Identifier: 116690764
GI number: 116690764
Start: 3041405
End: 3041851
Strand: Reverse
Name: marR [C]
Synonym: Bcen2424_2744
Alternate gene names: 116690764
Gene position: 3041851-3041405 (Counterclockwise)
Preceding gene: 116690765
Following gene: 116690761
Centisome position: 87.31
GC content: 67.56
Gene sequence:
>447_bases ATGGAAGAACAGGACCGCGTCGCGATCTTGCAGCAATTCGGACGCACGTATCGCGCCTTCATGACCGCGTTCGAAGCGCA CGTCGGGCAGCCGATGCCGCGCTGGCGCATCATGGTCGCGCTGCACACGATGGACGGTCATGCGTCGCAGAAGAAGCTCG TCGAAGTGCTGCGCATCGATCCGGGCGCGCTCACGCGCCAGTTGAAGTCGCTCGACGCGCTCGGCTGGATCGAGCGTGCA TCGGACGCGCGCGACAACCGCGTGACCAACGTCACGCTGACGGACGCCGGCCGCGCGGCGTTCGACGCGTGCCTGCCGCG CCGCAAGGCGTTTCTCGAACAGACGATGGCGCAGTTGCCGGACGACGTGCTGAATGCGCTGTCGGGCGCGCTCGCGATGC TGGAATCGCGGATCGCGGACGTCGGGTCGACGCCAGCCGCGCGTTGA
Upstream 100 bases:
>100_bases GATCGCGCTGCGGCGCAAGATCGAACCGCACGTCGCGGCCGATTGACCGATCGGGCGAGCGATTCGACGACTCAACGATT CACCGGAACGAAATCAGCGC
Downstream 100 bases:
>100_bases CGTGCGGAGCCGGGCGGCACGTCAGCGCCGCCGGCCATCGCTTCGTTTCATTCCGAGTGGGTGCAGGTTTACAGCTCGAT GCGCGTGCCGAGCAGCGCGA
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulatory Protein MarR; Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulatory Protein Marr; Transcriptional Regulator MarR Family Protein; MarR Family Regulatory Helix-Turn-Helix Protein
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MEEQDRVAILQQFGRTYRAFMTAFEAHVGQPMPRWRIMVALHTMDGHASQKKLVEVLRIDPGALTRQLKSLDALGWIERA SDARDNRVTNVTLTDAGRAAFDACLPRRKAFLEQTMAQLPDDVLNALSGALAMLESRIADVGSTPAAR
Sequences:
>Translated_148_residues MEEQDRVAILQQFGRTYRAFMTAFEAHVGQPMPRWRIMVALHTMDGHASQKKLVEVLRIDPGALTRQLKSLDALGWIERA SDARDNRVTNVTLTDAGRAAFDACLPRRKAFLEQTMAQLPDDVLNALSGALAMLESRIADVGSTPAAR >Mature_148_residues MEEQDRVAILQQFGRTYRAFMTAFEAHVGQPMPRWRIMVALHTMDGHASQKKLVEVLRIDPGALTRQLKSLDALGWIERA SDARDNRVTNVTLTDAGRAAFDACLPRRKAFLEQTMAQLPDDVLNALSGALAMLESRIADVGSTPAAR
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16419; Mature: 16419
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEQDRVAILQQFGRTYRAFMTAFEAHVGQPMPRWRIMVALHTMDGHASQKKLVEVLRID CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCC PGALTRQLKSLDALGWIERASDARDNRVTNVTLTDAGRAAFDACLPRRKAFLEQTMAQLP CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC DDVLNALSGALAMLESRIADVGSTPAAR HHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MEEQDRVAILQQFGRTYRAFMTAFEAHVGQPMPRWRIMVALHTMDGHASQKKLVEVLRID CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCC PGALTRQLKSLDALGWIERASDARDNRVTNVTLTDAGRAAFDACLPRRKAFLEQTMAQLP CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC DDVLNALSGALAMLESRIADVGSTPAAR HHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA