| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690754
Identifier: 116690754
GI number: 116690754
Start: 3028148
End: 3028591
Strand: Reverse
Name: 116690754
Synonym: Bcen2424_2734
Alternate gene names: NA
Gene position: 3028591-3028148 (Counterclockwise)
Preceding gene: 116690755
Following gene: 116690753
Centisome position: 86.93
GC content: 66.89
Gene sequence:
>444_bases ATGGAATGCGTGTTTTGCCGTGAAGACGGCGGCGAGGTGCTCTGGCAGGACGATGCGCTGCGCGTCGTGCTCGCCACGGG CGAGCACGACTACCCGGGCTTCTGCCGGGTGATCTGGGGCGCGCACGTGGCCGAGTTCTCCGATCTCGGCGAGCCCGAAC GGGCACATCTGATGCGCGTGGTCTACGCGGTCGAGCGGGCCGTGCGCCGCGTGATGCAGCCGAACAAGGTGAATCTCGCG AGCCTCGGCAACATGGTGCCGCACGTGCACTGGCACGTGATTCCGCGTTTTTCCAACGATGCCCATTTTCCGCAGCCCGT GTGGGCGCCGCGCCAGCGCAGCGTGTCCGAGGCGCTGCTGCGCTCGCGCGCGGCGCAGGCCTCGCTGCTGCACAATGCGG TGCGCGAGGAAATTCAACGCATGACCGATTCGAGGCAAGCATGA
Upstream 100 bases:
>100_bases GCGCGTGCTGGTCTAATGCGGGCATGACGACCGCCCGACCGGGCCGGGAATGAGCGGGCGCCGGCATGCCATGCCGGCGC CTGTCCACATGGGAGCGACG
Downstream 100 bases:
>100_bases GCGGTTTGACTTCCACGACGCCGATTCCGTCCGGCGTCGTCGTGCACGCGGTGTCGCGCGTGCTCGAATTGCAGTATCCG AACGGCGAGAGTTACCGGAT
Product: histidine triad (HIT) protein
Products: NA
Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; Diadenosine Tetraphosphate Hydrolase; HIT Family Protein; Histidine Triad-Like; Histidine Triad Family Hydrolase; HIT Domain-Containing Protein; HIT Domain-Containing
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MECVFCREDGGEVLWQDDALRVVLATGEHDYPGFCRVIWGAHVAEFSDLGEPERAHLMRVVYAVERAVRRVMQPNKVNLA SLGNMVPHVHWHVIPRFSNDAHFPQPVWAPRQRSVSEALLRSRAAQASLLHNAVREEIQRMTDSRQA
Sequences:
>Translated_147_residues MECVFCREDGGEVLWQDDALRVVLATGEHDYPGFCRVIWGAHVAEFSDLGEPERAHLMRVVYAVERAVRRVMQPNKVNLA SLGNMVPHVHWHVIPRFSNDAHFPQPVWAPRQRSVSEALLRSRAAQASLLHNAVREEIQRMTDSRQA >Mature_147_residues MECVFCREDGGEVLWQDDALRVVLATGEHDYPGFCRVIWGAHVAEFSDLGEPERAHLMRVVYAVERAVRRVMQPNKVNLA SLGNMVPHVHWHVIPRFSNDAHFPQPVWAPRQRSVSEALLRSRAAQASLLHNAVREEIQRMTDSRQA
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16789; Mature: 16789
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECVFCREDGGEVLWQDDALRVVLATGEHDYPGFCRVIWGAHVAEFSDLGEPERAHLMRV CCEEEEECCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH VYAVERAVRRVMQPNKVNLASLGNMVPHVHWHVIPRFSNDAHFPQPVWAPRQRSVSEALL HHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH RSRAAQASLLHNAVREEIQRMTDSRQA HHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MECVFCREDGGEVLWQDDALRVVLATGEHDYPGFCRVIWGAHVAEFSDLGEPERAHLMRV CCEEEEECCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH VYAVERAVRRVMQPNKVNLASLGNMVPHVHWHVIPRFSNDAHFPQPVWAPRQRSVSEALL HHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH RSRAAQASLLHNAVREEIQRMTDSRQA HHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA