Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116690753

Identifier: 116690753

GI number: 116690753

Start: 3027738

End: 3028151

Strand: Reverse

Name: 116690753

Synonym: Bcen2424_2733

Alternate gene names: NA

Gene position: 3028151-3027738 (Counterclockwise)

Preceding gene: 116690754

Following gene: 116690752

Centisome position: 86.92

GC content: 66.91

Gene sequence:

>414_bases
ATGAGCGGTTTGACTTCCACGACGCCGATTCCGTCCGGCGTCGTCGTGCACGCGGTGTCGCGCGTGCTCGAATTGCAGTA
TCCGAACGGCGAGAGTTACCGGATTCCGTTCGAGCTGATGCGCGTCTATTCGCCGTCGGCCGAGGTGCGCGGCCACGGGC
CCGGCCAGGAGACGTTGCAGACCGGCAAGCGCGAAGTGACGATCACCGCGCTCGAGGGCGTCGGCAACTATGCGCTGCAG
CCGACATTCTCCGACGGCCATTCGACCGGCATCTACTCGTGGGACCTGCTGTACGAGCTGGCGACGCAGCAGGACGCGCT
GTGGCGCGACTATTTCGACAAACTGAAGGCGGCGGGCGTCGAGCGCGACGCGCCGATGCAGGCGGCCAGCGCGCCGCACG
GCCACTGCCACTGA

Upstream 100 bases:

>100_bases
GCGTGTCCGAGGCGCTGCTGCGCTCGCGCGCGGCGCAGGCCTCGCTGCTGCACAATGCGGTGCGCGAGGAAATTCAACGC
ATGACCGATTCGAGGCAAGC

Downstream 100 bases:

>100_bases
AATCGACGGCGCCCGCTCGGCGCCGTCTTGCCATTTACTGAGGATCAACGCGATGAGCAAAACCCACTTCGGCTTCGAGA
GCGTCGAGGAAAACGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSGLTSTTPIPSGVVVHAVSRVLELQYPNGESYRIPFELMRVYSPSAEVRGHGPGQETLQTGKREVTITALEGVGNYALQ
PTFSDGHSTGIYSWDLLYELATQQDALWRDYFDKLKAAGVERDAPMQAASAPHGHCH

Sequences:

>Translated_137_residues
MSGLTSTTPIPSGVVVHAVSRVLELQYPNGESYRIPFELMRVYSPSAEVRGHGPGQETLQTGKREVTITALEGVGNYALQ
PTFSDGHSTGIYSWDLLYELATQQDALWRDYFDKLKAAGVERDAPMQAASAPHGHCH
>Mature_136_residues
SGLTSTTPIPSGVVVHAVSRVLELQYPNGESYRIPFELMRVYSPSAEVRGHGPGQETLQTGKREVTITALEGVGNYALQP
TFSDGHSTGIYSWDLLYELATQQDALWRDYFDKLKAAGVERDAPMQAASAPHGHCH

Specific function: Unknown

COG id: COG3536

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14989; Mature: 14858

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLTSTTPIPSGVVVHAVSRVLELQYPNGESYRIPFELMRVYSPSAEVRGHGPGQETLQ
CCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCEECHHHHHHHHCCCCCCCCCCCCHHHHH
TGKREVTITALEGVGNYALQPTFSDGHSTGIYSWDLLYELATQQDALWRDYFDKLKAAGV
CCCCEEEEEEECCCCCEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ERDAPMQAASAPHGHCH
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SGLTSTTPIPSGVVVHAVSRVLELQYPNGESYRIPFELMRVYSPSAEVRGHGPGQETLQ
CCCCCCCCCCCCHHHHHHHHHHHEECCCCCCEECHHHHHHHHCCCCCCCCCCCCHHHHH
TGKREVTITALEGVGNYALQPTFSDGHSTGIYSWDLLYELATQQDALWRDYFDKLKAAGV
CCCCEEEEEEECCCCCEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ERDAPMQAASAPHGHCH
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA