Click here to switch to the map view.

The map label for this gene is alsB [C]

Identifier: 116690703

GI number: 116690703

Start: 2972610

End: 2973674

Strand: Direct

Name: alsB [C]

Synonym: Bcen2424_2683

Alternate gene names: 116690703

Gene position: 2972610-2973674 (Clockwise)

Preceding gene: 116690699

Following gene: 116690704

Centisome position: 85.32

GC content: 72.02

Gene sequence:

>1065_bases
ATGGCAGGTGAATCCGGGCCGCGCTGGCGCAAGCGCACCGCGCGCTTCGACGAGATCGCGGCGCTCGCCGGCGTCAGCAC
GACGACCGTCGACCGCGTGCTGAACGAGCGCGGCAGCGTCTCCGCGCAGGCGCGCGAACGCGTGGTGGCGGCCGCGCGGC
AACTCGGCGTGCCGCGGCAGTTGCCCGACACGCGGCACGGGTTGATCCACGTCGACGTGCTGCTGCCGGACACCGACGCG
CCGTTCTTCCGACGATTGCAGCAGGCGCTGCAGCGCTCGCTGCAGATGCTCGACCGGCGCGTGGTCGTGCACCGGACGAT
CCTGCCCGCCGCGGACGACGCACGCGCCGCCGCGCTGATCGAACGGCCCGCGTACCGGCGCGCGGCGCTGATCGTCACCG
CGCACGACACGGCCCGCGTGCGTGACGCACTGGCTGCCGCGATCGCGCGGGGCGAGACCGTCGTCACAATGGTCACCGAC
ATCGGCGGCATCGACCGCGCGCACTTCGCCGGCATCGACAACTATCGCGCCGGGCGCACGGCCGGCTACTACATCGGCCG
CCTCGCCGCACGCCCCGGCCGCGTGCTGCTGCTCGGCGGCCGGATGGGCTACCGCGCGCACGCCGACCGGATGGCCGGCT
GCCGCGATCAGCTCGCCGACGCGTTCGCCGCCGTGCGCTGCGACGATGAACCGATCGAGACGCTCGACCAGGACGACCGC
TGCTACCGCGCGGTGTCGAAGGCGCTGCAGGCGCACGACGACGTGGTCGCGATCTACAACAGCGGCGCCGGTTCGGCCGG
CATCGAAGCGGCGCTGCGCAAGGCCGGCGCGATCGGGCGCGTGGTGTGGATCGGCCACGAGATGATCGACCAGCACCGTA
CCTTCATCGAAGCCGGCGCGATGGATCTCGCGATCGACCAGGACCCGGACGGACAAGCGATTTCCGCGCTGCAGCACGTG
CTGCATGCGTGCGGCATCGTCGAACAGCCGCCGCCGGACGACCCGGTCGAATTCCGTGTGTTCTGTCCGGCGAACGTGAG
GACGAGCGCATACCTGCAGGCGTGA

Upstream 100 bases:

>100_bases
CCGCCCCGCCTCAATCGAAACGTTGACGAAATTTCGCCATCGCTTTAGCGTTCCCGACAACGCCACGCGATCGATGGCGA
CCCTCACGATGGAGACGACC

Downstream 100 bases:

>100_bases
ATCCCGCCGTGCGGCGCACCGCGTGCGCACGATGAAAAAATCGACCGCGGCATGGGCGATTTTTCGTCAACGTTCGTCAT
GCAGCCCGCGCCGCGCATCC

Product: LacI family transcription regulator

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: LacI Family Transcription Regulator; Regulatory Protein LacI; LacI Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Protein; LacI Family Regulatory Protein; Transcriptional Regulator Protein LacI Family; Regulatory Protein LacI Family; ABC-Type Sugar Transport System Periplasmic Component; Regulatory Protein; Transcriptional Regulator LacI Family Protein; LacI Family Regulatory; Transcription Regulator Protein; HTH-Type Transcriptional Repressor Purr; Laci-Family Transcription Regulator; HTH-Type Transcriptional Repressor PurR; Transcriptional Regulatory Protein LacI Family; Transcription Regulator

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MAGESGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSAQARERVVAAARQLGVPRQLPDTRHGLIHVDVLLPDTDA
PFFRRLQQALQRSLQMLDRRVVVHRTILPAADDARAAALIERPAYRRAALIVTAHDTARVRDALAAAIARGETVVTMVTD
IGGIDRAHFAGIDNYRAGRTAGYYIGRLAARPGRVLLLGGRMGYRAHADRMAGCRDQLADAFAAVRCDDEPIETLDQDDR
CYRAVSKALQAHDDVVAIYNSGAGSAGIEAALRKAGAIGRVVWIGHEMIDQHRTFIEAGAMDLAIDQDPDGQAISALQHV
LHACGIVEQPPPDDPVEFRVFCPANVRTSAYLQA

Sequences:

>Translated_354_residues
MAGESGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSAQARERVVAAARQLGVPRQLPDTRHGLIHVDVLLPDTDA
PFFRRLQQALQRSLQMLDRRVVVHRTILPAADDARAAALIERPAYRRAALIVTAHDTARVRDALAAAIARGETVVTMVTD
IGGIDRAHFAGIDNYRAGRTAGYYIGRLAARPGRVLLLGGRMGYRAHADRMAGCRDQLADAFAAVRCDDEPIETLDQDDR
CYRAVSKALQAHDDVVAIYNSGAGSAGIEAALRKAGAIGRVVWIGHEMIDQHRTFIEAGAMDLAIDQDPDGQAISALQHV
LHACGIVEQPPPDDPVEFRVFCPANVRTSAYLQA
>Mature_353_residues
AGESGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSAQARERVVAAARQLGVPRQLPDTRHGLIHVDVLLPDTDAP
FFRRLQQALQRSLQMLDRRVVVHRTILPAADDARAAALIERPAYRRAALIVTAHDTARVRDALAAAIARGETVVTMVTDI
GGIDRAHFAGIDNYRAGRTAGYYIGRLAARPGRVLLLGGRMGYRAHADRMAGCRDQLADAFAAVRCDDEPIETLDQDDRC
YRAVSKALQAHDDVVAIYNSGAGSAGIEAALRKAGAIGRVVWIGHEMIDQHRTFIEAGAMDLAIDQDPDGQAISALQHVL
HACGIVEQPPPDDPVEFRVFCPANVRTSAYLQA

Specific function: Part Of The Binding-Protein-Dependent Transport System Alsbac For D-Allose. [C]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38457; Mature: 38326

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGESGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSAQARERVVAAARQLGVPRQ
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
LPDTRHGLIHVDVLLPDTDAPFFRRLQQALQRSLQMLDRRVVVHRTILPAADDARAAALI
CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ERPAYRRAALIVTAHDTARVRDALAAAIARGETVVTMVTDIGGIDRAHFAGIDNYRAGRT
HCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCCCCCCCH
AGYYIGRLAARPGRVLLLGGRMGYRAHADRMAGCRDQLADAFAAVRCDDEPIETLDQDDR
HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHH
CYRAVSKALQAHDDVVAIYNSGAGSAGIEAALRKAGAIGRVVWIGHEMIDQHRTFIEAGA
HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCC
MDLAIDQDPDGQAISALQHVLHACGIVEQPPPDDPVEFRVFCPANVRTSAYLQA
EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCEECC
>Mature Secondary Structure 
AGESGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSAQARERVVAAARQLGVPRQ
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
LPDTRHGLIHVDVLLPDTDAPFFRRLQQALQRSLQMLDRRVVVHRTILPAADDARAAALI
CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ERPAYRRAALIVTAHDTARVRDALAAAIARGETVVTMVTDIGGIDRAHFAGIDNYRAGRT
HCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCCCCCCCH
AGYYIGRLAARPGRVLLLGGRMGYRAHADRMAGCRDQLADAFAAVRCDDEPIETLDQDDR
HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHH
CYRAVSKALQAHDDVVAIYNSGAGSAGIEAALRKAGAIGRVVWIGHEMIDQHRTFIEAGA
HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCC
MDLAIDQDPDGQAISALQHVLHACGIVEQPPPDDPVEFRVFCPANVRTSAYLQA
EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA