| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is ywrD [H]
Identifier: 116690693
GI number: 116690693
Start: 2961999
End: 2963639
Strand: Reverse
Name: ywrD [H]
Synonym: Bcen2424_2673
Alternate gene names: 116690693
Gene position: 2963639-2961999 (Counterclockwise)
Preceding gene: 116690696
Following gene: 116690692
Centisome position: 85.07
GC content: 70.26
Gene sequence:
>1641_bases ATGAGTGGCTTCAACTGGCACAACCCGTATCCGACGACCCGCATTCCGGTGTTCGCGCGCAACGTCGTGTCGACGTCGCA CCCGCTGGCCGCGCAGGCCGGGCTGCGGATGCTGTGGAAGGGCGGCAACGCGGTGGACGCGGCGCTGGCCGCCGCCGCCG CGATCACGGTCGTCGAGCCCGTGTCGTGCGGGCTCGGCGGCGATGCATTCGCGCTCGTGTGGGACGGCGAGCGGCTGTCC GGGCTGAACGCATCGGGCGTCGCGCCGGCCGCCTGGAACGTCGACTACTTCCGCAAGCGCCACGGCGAGGATGCGCGCGG CATCGCGAACAAGCCGACGCGCGGCTGGGACACCGTCACCGTGCCGGGCGTGATCGCGGGCTGGGAAGCGCTGCACGCAA AGTTCGGTTCGCTGCCGTTCGCGGATCTGCTCGAGCCGGCGATCGAGATCGCGGAGCGCGGCTATTCGGTGCCGCCGATC GTCGCGCACAAGTGGGCCGCGGCCGTTCCCGAACTGCAGGACCTGCCGGGCTTCGCCGACACCTTCATGCCGCGCGGCCG CGCGCCGCTCGTCGGCGAACGCGTGTGCCTGCCCGGTCATGCACGGACGCTGCGCACGCTCGCGAAGGACGGCGCCCGGG CGTTCTACGAAGGGGCGCTCGCCGAGCGGATCGCCGCCTTCGCGCGCGAAGGCGGCGGCGCGCTGACCGAAGCGGACCTG CGCGCGTACCGGCCGGAATGGGTCGAGCCGATCGGCAAGCGCTTCGGCCGCCACACGATTCACGAGATCCCGCCGAACGG GCAGGGCATCGCCGCGCTGATCGCGCTCGGCATCGCCGAGCATGCGGGCGTGACCGAATGGCCGGTCGACTCGGTCGATT CGCAGCATCTGCAGATCGAGGCGATGAAGCTCGCGTTCGCGGACGTCTATCGCTACGTCGCCGATCCGCGCGCGATGGAG CTCACGCCCGAACAGATGCTCGACGATGCGTATCTCGCCGAACGCGCGAAGCTGATCGATCGCGCGCGGGCCACACACTT CGCCGCCGGCCGTCCGCATTCCGGCGGCACGATCTACCTGTCGGCGGCCGACGAGCGCGGGATGATGGTGAGCTTCATCC AGTCGAACTACATGGGCTTCGGCTCGGGCCTCGTCGTCCCCGGCACGGGCATTGCGCTGCAGAACCGCGGGCACGGCTTC TCGATGGACCCGGCTTCGCCGAACGTCGTCGCGGGCGGCAAGCGACCGTTCCACACGATCATTCCGGCGTTCGTCACCGA GGAAGTCGACGGCCGTACCGAGGCCGTGATGAGCTTCGGCGTGATGGGCGGCGACATGCAGCCGCAGGGCCACCTGCAGA CCATCGTCCGGATGCTCGGCTATGGCCAGCAGCCGCAGGCCGCGTGTTGCGCGCCGCGCTGGAAGGTCAACCGCGACTTC ACGCTCGACGTCGAGGCGACGATGAACCGCGCGACCGTCGATGGGCTGGCCGCCCGCGGCCATACGATCAAGTCGATCGA CGATCCTTACATGGATTTCGGCTCGGGGCAGTTCGTCTGGCGCCTCGATCCCGACGATCCGGAGCGCGGCTACGTGGCCG CGAGCGACAGCCGGCGCGACGGGCTGGCGGCCGGTTTCTGA
Upstream 100 bases:
>100_bases ATGTGACAAATGAATTTGCGCGATGGCGCTGATCGCGCTGCAATGGCGGATTGCCCGCTCGCGCGGGCACGTTCATTCAG CTTTCGACGAGGTGGTATCG
Downstream 100 bases:
>100_bases CGGATCGCTTCCAGCTTCCTATGCAGTTTCCCGGCATCACGGGCGGCCCGACGGCCGCCCGTTTTCATTTGGCGCGGCGC CTGCCATCGAACGCGCGCAA
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MSGFNWHNPYPTTRIPVFARNVVSTSHPLAAQAGLRMLWKGGNAVDAALAAAAAITVVEPVSCGLGGDAFALVWDGERLS GLNASGVAPAAWNVDYFRKRHGEDARGIANKPTRGWDTVTVPGVIAGWEALHAKFGSLPFADLLEPAIEIAERGYSVPPI VAHKWAAAVPELQDLPGFADTFMPRGRAPLVGERVCLPGHARTLRTLAKDGARAFYEGALAERIAAFAREGGGALTEADL RAYRPEWVEPIGKRFGRHTIHEIPPNGQGIAALIALGIAEHAGVTEWPVDSVDSQHLQIEAMKLAFADVYRYVADPRAME LTPEQMLDDAYLAERAKLIDRARATHFAAGRPHSGGTIYLSAADERGMMVSFIQSNYMGFGSGLVVPGTGIALQNRGHGF SMDPASPNVVAGGKRPFHTIIPAFVTEEVDGRTEAVMSFGVMGGDMQPQGHLQTIVRMLGYGQQPQAACCAPRWKVNRDF TLDVEATMNRATVDGLAARGHTIKSIDDPYMDFGSGQFVWRLDPDDPERGYVAASDSRRDGLAAGF
Sequences:
>Translated_546_residues MSGFNWHNPYPTTRIPVFARNVVSTSHPLAAQAGLRMLWKGGNAVDAALAAAAAITVVEPVSCGLGGDAFALVWDGERLS GLNASGVAPAAWNVDYFRKRHGEDARGIANKPTRGWDTVTVPGVIAGWEALHAKFGSLPFADLLEPAIEIAERGYSVPPI VAHKWAAAVPELQDLPGFADTFMPRGRAPLVGERVCLPGHARTLRTLAKDGARAFYEGALAERIAAFAREGGGALTEADL RAYRPEWVEPIGKRFGRHTIHEIPPNGQGIAALIALGIAEHAGVTEWPVDSVDSQHLQIEAMKLAFADVYRYVADPRAME LTPEQMLDDAYLAERAKLIDRARATHFAAGRPHSGGTIYLSAADERGMMVSFIQSNYMGFGSGLVVPGTGIALQNRGHGF SMDPASPNVVAGGKRPFHTIIPAFVTEEVDGRTEAVMSFGVMGGDMQPQGHLQTIVRMLGYGQQPQAACCAPRWKVNRDF TLDVEATMNRATVDGLAARGHTIKSIDDPYMDFGSGQFVWRLDPDDPERGYVAASDSRRDGLAAGF >Mature_545_residues SGFNWHNPYPTTRIPVFARNVVSTSHPLAAQAGLRMLWKGGNAVDAALAAAAAITVVEPVSCGLGGDAFALVWDGERLSG LNASGVAPAAWNVDYFRKRHGEDARGIANKPTRGWDTVTVPGVIAGWEALHAKFGSLPFADLLEPAIEIAERGYSVPPIV AHKWAAAVPELQDLPGFADTFMPRGRAPLVGERVCLPGHARTLRTLAKDGARAFYEGALAERIAAFAREGGGALTEADLR AYRPEWVEPIGKRFGRHTIHEIPPNGQGIAALIALGIAEHAGVTEWPVDSVDSQHLQIEAMKLAFADVYRYVADPRAMEL TPEQMLDDAYLAERAKLIDRARATHFAAGRPHSGGTIYLSAADERGMMVSFIQSNYMGFGSGLVVPGTGIALQNRGHGFS MDPASPNVVAGGKRPFHTIIPAFVTEEVDGRTEAVMSFGVMGGDMQPQGHLQTIVRMLGYGQQPQAACCAPRWKVNRDFT LDVEATMNRATVDGLAARGHTIKSIDDPYMDFGSGQFVWRLDPDDPERGYVAASDSRRDGLAAGF
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=557, Percent_Identity=27.4685816876122, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI73915090, Length=557, Percent_Identity=27.4685816876122, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI73915096, Length=557, Percent_Identity=27.4685816876122, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI73915094, Length=557, Percent_Identity=27.4685816876122, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI113429324, Length=557, Percent_Identity=26.3913824057451, Blast_Score=139, Evalue=9e-33, Organism=Homo sapiens, GI113429326, Length=562, Percent_Identity=26.1565836298932, Blast_Score=135, Evalue=9e-32, Organism=Homo sapiens, GI109148539, Length=520, Percent_Identity=28.8461538461538, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI153266885, Length=556, Percent_Identity=25, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI153266901, Length=557, Percent_Identity=25.1346499102334, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI153266907, Length=554, Percent_Identity=24.9097472924188, Blast_Score=115, Evalue=1e-25, Organism=Escherichia coli, GI1789856, Length=560, Percent_Identity=28.9285714285714, Blast_Score=177, Evalue=2e-45, Organism=Caenorhabditis elegans, GI72000294, Length=513, Percent_Identity=25.9259259259259, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI212646519, Length=513, Percent_Identity=25.9259259259259, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17542894, Length=569, Percent_Identity=25.1318101933216, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17506189, Length=534, Percent_Identity=23.7827715355805, Blast_Score=113, Evalue=3e-25, Organism=Caenorhabditis elegans, GI193208245, Length=512, Percent_Identity=25.1953125, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI193208247, Length=512, Percent_Identity=25.1953125, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24642670, Length=558, Percent_Identity=26.3440860215054, Blast_Score=138, Evalue=8e-33, Organism=Drosophila melanogaster, GI24642666, Length=558, Percent_Identity=26.3440860215054, Blast_Score=138, Evalue=8e-33, Organism=Drosophila melanogaster, GI161077878, Length=558, Percent_Identity=26.3440860215054, Blast_Score=138, Evalue=9e-33, Organism=Drosophila melanogaster, GI45551474, Length=558, Percent_Identity=26.3440860215054, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI161077880, Length=558, Percent_Identity=26.3440860215054, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI18859741, Length=531, Percent_Identity=26.7419962335217, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI18859893, Length=430, Percent_Identity=26.9767441860465, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI161077496, Length=517, Percent_Identity=27.0793036750484, Blast_Score=117, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 58686; Mature: 58555
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGFNWHNPYPTTRIPVFARNVVSTSHPLAAQAGLRMLWKGGNAVDAALAAAAAITVVEP CCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHCHHEEECCCCHHHHHHHHHHHHHEECC VSCGLGGDAFALVWDGERLSGLNASGVAPAAWNVDYFRKRHGEDARGIANKPTRGWDTVT CCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEE VPGVIAGWEALHAKFGSLPFADLLEPAIEIAERGYSVPPIVAHKWAAAVPELQDLPGFAD CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHCCCCHH TFMPRGRAPLVGERVCLPGHARTLRTLAKDGARAFYEGALAERIAAFAREGGGALTEADL HHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH RAYRPEWVEPIGKRFGRHTIHEIPPNGQGIAALIALGIAEHAGVTEWPVDSVDSQHLQIE HHCCCHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHH AMKLAFADVYRYVADPRAMELTPEQMLDDAYLAERAKLIDRARATHFAAGRPHSGGTIYL HHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE SAADERGMMVSFIQSNYMGFGSGLVVPGTGIALQNRGHGFSMDPASPNVVAGGKRPFHTI EECCCCCCCCEEHHHCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCEEECCCCCHHHH IPAFVTEEVDGRTEAVMSFGVMGGDMQPQGHLQTIVRMLGYGQQPQAACCAPRWKVNRDF HHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCE TLDVEATMNRATVDGLAARGHTIKSIDDPYMDFGSGQFVWRLDPDDPERGYVAASDSRRD EEEHHHHCCHHHHHHHHHCCCCCCCCCCCHHCCCCCEEEEEECCCCCCCCEEEECCCCCC GLAAGF CCCCCC >Mature Secondary Structure SGFNWHNPYPTTRIPVFARNVVSTSHPLAAQAGLRMLWKGGNAVDAALAAAAAITVVEP CCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHCHHEEECCCCHHHHHHHHHHHHHEECC VSCGLGGDAFALVWDGERLSGLNASGVAPAAWNVDYFRKRHGEDARGIANKPTRGWDTVT CCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEE VPGVIAGWEALHAKFGSLPFADLLEPAIEIAERGYSVPPIVAHKWAAAVPELQDLPGFAD CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHCCCCHH TFMPRGRAPLVGERVCLPGHARTLRTLAKDGARAFYEGALAERIAAFAREGGGALTEADL HHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH RAYRPEWVEPIGKRFGRHTIHEIPPNGQGIAALIALGIAEHAGVTEWPVDSVDSQHLQIE HHCCCHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHH AMKLAFADVYRYVADPRAMELTPEQMLDDAYLAERAKLIDRARATHFAAGRPHSGGTIYL HHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE SAADERGMMVSFIQSNYMGFGSGLVVPGTGIALQNRGHGFSMDPASPNVVAGGKRPFHTI EECCCCCCCCEEHHHCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCEEECCCCCHHHH IPAFVTEEVDGRTEAVMSFGVMGGDMQPQGHLQTIVRMLGYGQQPQAACCAPRWKVNRDF HHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCE TLDVEATMNRATVDGLAARGHTIKSIDDPYMDFGSGQFVWRLDPDDPERGYVAASDSRRD EEEHHHHCCHHHHHHHHHCCCCCCCCCCCHHCCCCCEEEEEECCCCCCCCEEEECCCCCC GLAAGF CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]