| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690691
Identifier: 116690691
GI number: 116690691
Start: 2960267
End: 2960773
Strand: Reverse
Name: 116690691
Synonym: Bcen2424_2671
Alternate gene names: NA
Gene position: 2960773-2960267 (Counterclockwise)
Preceding gene: 116690692
Following gene: 116690687
Centisome position: 84.98
GC content: 70.81
Gene sequence:
>507_bases ATGACCGATACCCATCGCCACGCGCTCGAACAATGGACGTTCGACACGTGGCCGTCCGCCGTCGTGTCGCTGTTCGACGG CACCGCACTCGAGCGTCATGCCGACCTCGCCGCGTCGCTGATCGTCGCGACCGACGACGGCCAGTTGCGCACGACGCTGC TCAGCGTCGGCGAGATCTATGCACACGATGCGCGCACGCTGCTGATCGCGCTCTGGCCTCAGTCGCGGGCGGCGCGCGCG ATCGCGCAGCGGCGCACGGCCGCGTTGACGCTCGTCGCGGACGGCGCGTTCTTTCAGGCGCAACTGGAGATGGTGCCGCT CGAAGGGGACTTCGGCGGCCTGGCCGGATTCGCCGCGACGATCGCGCACGGCGATGCGCAGCGGGTCGGCTATGCGCGTC TCGCGACCGGCGTCACGTTCACGCTGGAAGGGGAGCGCGCCGCGGTGCTCGCACGCTGGCAACGCCAGATCGAGCACCTG CGGCGCGCGGCCGCGCGGCTTCAGTGA
Upstream 100 bases:
>100_bases AAGATCACGCGGCACGTTTTCCTGCGCTGATCGCCGCGGCACGGCCCGGCGCGCGTATGCTGACGCATCCTCATCCGATC CGCGCCCGGGCCACGCCATC
Downstream 100 bases:
>100_bases CCGCGCTGGCCGCTGCGCGACGAACGGTTGCGGTTCGGATGCGCGGCGTTGCCGCTTGCCGGGCGGGCGCCGTTGCCGCC ACCTGCCGGACGTCCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTDTHRHALEQWTFDTWPSAVVSLFDGTALERHADLAASLIVATDDGQLRTTLLSVGEIYAHDARTLLIALWPQSRAARA IAQRRTAALTLVADGAFFQAQLEMVPLEGDFGGLAGFAATIAHGDAQRVGYARLATGVTFTLEGERAAVLARWQRQIEHL RRAAARLQ
Sequences:
>Translated_168_residues MTDTHRHALEQWTFDTWPSAVVSLFDGTALERHADLAASLIVATDDGQLRTTLLSVGEIYAHDARTLLIALWPQSRAARA IAQRRTAALTLVADGAFFQAQLEMVPLEGDFGGLAGFAATIAHGDAQRVGYARLATGVTFTLEGERAAVLARWQRQIEHL RRAAARLQ >Mature_167_residues TDTHRHALEQWTFDTWPSAVVSLFDGTALERHADLAASLIVATDDGQLRTTLLSVGEIYAHDARTLLIALWPQSRAARAI AQRRTAALTLVADGAFFQAQLEMVPLEGDFGGLAGFAATIAHGDAQRVGYARLATGVTFTLEGERAAVLARWQRQIEHLR RAAARLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18319; Mature: 18188
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTHRHALEQWTFDTWPSAVVSLFDGTALERHADLAASLIVATDDGQLRTTLLSVGEIY CCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHH AHDARTLLIALWPQSRAARAIAQRRTAALTLVADGAFFQAQLEMVPLEGDFGGLAGFAAT HCCCEEEEEEECCCHHHHHHHHHHHHHEEEEEECCCEEEEEEEEEEECCCCCHHHHHHHH IAHGDAQRVGYARLATGVTFTLEGERAAVLARWQRQIEHLRRAAARLQ HHCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDTHRHALEQWTFDTWPSAVVSLFDGTALERHADLAASLIVATDDGQLRTTLLSVGEIY CCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHH AHDARTLLIALWPQSRAARAIAQRRTAALTLVADGAFFQAQLEMVPLEGDFGGLAGFAAT HCCCEEEEEEECCCHHHHHHHHHHHHHEEEEEECCCEEEEEEEEEEECCCCCHHHHHHHH IAHGDAQRVGYARLATGVTFTLEGERAAVLARWQRQIEHLRRAAARLQ HHCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA