| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690680
Identifier: 116690680
GI number: 116690680
Start: 2947210
End: 2947494
Strand: Reverse
Name: 116690680
Synonym: Bcen2424_2660
Alternate gene names: NA
Gene position: 2947494-2947210 (Counterclockwise)
Preceding gene: 116690683
Following gene: 116690677
Centisome position: 84.6
GC content: 64.91
Gene sequence:
>285_bases ATGAGCCGCAAATTCATTCTGAAGGGCGACACGACCGATCACGGCGGCGTCGTGCTCGAAGGGATCGCCAATTCGTCGTT CGACGGGCGCGAACTCGCGTATCTCGGCGCAGCCGTGTTCTGCGCGGCGTGCAAGTCGCCGGGCGTGATCGTATCGGACG GCGGCGAGCGCACGATGACCGTGATGGGCAAGGTCGTCGCGCTCGAACACGACCTGTGCCAGTGCCAGTGCACGCCGCTA CCGAAACTGATCCCCTCGCAGGCAACCGGGACGATCTCGGGGTGA
Upstream 100 bases:
>100_bases AGCGGTGATATGCTCGCGGGACGCCCGCGACCGACGGGCGGTTTCACGATGCCCGTGCGCGGTTGCGTTGCGCGGCGTTT CCGAGGGAAGAACCGACATC
Downstream 100 bases:
>100_bases CCTTCGCCGCGCGACGGCGCTCGTCAGCCGCGCGACATCGAGACCCCGACGCCCGCCGTCAGACGCTGCCTTCGGTTTCG ATCACGAGGATGCGCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MSRKFILKGDTTDHGGVVLEGIANSSFDGRELAYLGAAVFCAACKSPGVIVSDGGERTMTVMGKVVALEHDLCQCQCTPL PKLIPSQATGTISG
Sequences:
>Translated_94_residues MSRKFILKGDTTDHGGVVLEGIANSSFDGRELAYLGAAVFCAACKSPGVIVSDGGERTMTVMGKVVALEHDLCQCQCTPL PKLIPSQATGTISG >Mature_93_residues SRKFILKGDTTDHGGVVLEGIANSSFDGRELAYLGAAVFCAACKSPGVIVSDGGERTMTVMGKVVALEHDLCQCQCTPLP KLIPSQATGTISG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9729; Mature: 9598
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKFILKGDTTDHGGVVLEGIANSSFDGRELAYLGAAVFCAACKSPGVIVSDGGERTMT CCCEEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEE VMGKVVALEHDLCQCQCTPLPKLIPSQATGTISG EHHHHHEECCCCCEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRKFILKGDTTDHGGVVLEGIANSSFDGRELAYLGAAVFCAACKSPGVIVSDGGERTMT CCEEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEE VMGKVVALEHDLCQCQCTPLPKLIPSQATGTISG EHHHHHEECCCCCEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA