| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690670
Identifier: 116690670
GI number: 116690670
Start: 2936406
End: 2937014
Strand: Reverse
Name: 116690670
Synonym: Bcen2424_2650
Alternate gene names: NA
Gene position: 2937014-2936406 (Counterclockwise)
Preceding gene: 116690671
Following gene: 116690669
Centisome position: 84.3
GC content: 67.32
Gene sequence:
>609_bases ATGCCGCTATCCGAGCCCGTGCCCCGTCAGTTGCGACATCGACGCGCAATCCGAGCGGAAGCCTACGAGCGCGGCGACGG CTTGTGGGACATCGAAGCCTGCCTGACCGACCACAAGCCGCGCGATGTCGCGCTTGCGTCGGGCATCCGGCCCCAGGGTC TGCCGATCCACGAACTCTGGCTGCGCGTGACCATCGATCGTGACCTCAATGTCGTCGACGCCGAAGCGTCTTCGGAATGG GTGCCCTATCCTGGTCATTGTCAATCCGCCCCGCCCACCTATCGGGCCCTCATCGGGCTCAATCTCTTCCGCAATTTCCG CCGCAACGCGAACCGGCTGCTCGCCGGCGTCGCAGGCTGTTCCCATCTCACCGAACTGTGCGCCGTGCTGCCGACGGCCG CGATCCAGGCGTTCGCCGGTGACGTGTGGAACGTGCGCGAGGAGGGCGGCGAAGGGCCGGATCACGACGGCGCGCACGCC GAACCGCCTTTCCAGCTCGGCCGCTGCCGCGCGCTGCGATTCGACGGTGAGGTCGTGCGGCAGTACTACCCGCGCTGGTA CGGCCCGATTCGGCCGGATCTGCCCGGTGAAGGCAGCACGAAGGAATGA
Upstream 100 bases:
>100_bases GCTTCCGGACAGGCGGGAATACCCGCCGTCGCGGCAAACTGTCTCAAATACCCAATATGCTAAAATCCACGGGTTTTCCT CTTCGGCCTCAACCTCCAGC
Downstream 100 bases:
>100_bases ACGGAAATCATTCGAAGAAGCGTCTTAAGCGACTTTTCATCCAACTCTCAGACTGAAGGGAATCACGCATGAAGATTCAC GAGTACCAGGGTAAGGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MPLSEPVPRQLRHRRAIRAEAYERGDGLWDIEACLTDHKPRDVALASGIRPQGLPIHELWLRVTIDRDLNVVDAEASSEW VPYPGHCQSAPPTYRALIGLNLFRNFRRNANRLLAGVAGCSHLTELCAVLPTAAIQAFAGDVWNVREEGGEGPDHDGAHA EPPFQLGRCRALRFDGEVVRQYYPRWYGPIRPDLPGEGSTKE
Sequences:
>Translated_202_residues MPLSEPVPRQLRHRRAIRAEAYERGDGLWDIEACLTDHKPRDVALASGIRPQGLPIHELWLRVTIDRDLNVVDAEASSEW VPYPGHCQSAPPTYRALIGLNLFRNFRRNANRLLAGVAGCSHLTELCAVLPTAAIQAFAGDVWNVREEGGEGPDHDGAHA EPPFQLGRCRALRFDGEVVRQYYPRWYGPIRPDLPGEGSTKE >Mature_201_residues PLSEPVPRQLRHRRAIRAEAYERGDGLWDIEACLTDHKPRDVALASGIRPQGLPIHELWLRVTIDRDLNVVDAEASSEWV PYPGHCQSAPPTYRALIGLNLFRNFRRNANRLLAGVAGCSHLTELCAVLPTAAIQAFAGDVWNVREEGGEGPDHDGAHAE PPFQLGRCRALRFDGEVVRQYYPRWYGPIRPDLPGEGSTKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22577; Mature: 22446
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSEPVPRQLRHRRAIRAEAYERGDGLWDIEACLTDHKPRDVALASGIRPQGLPIHELW CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCHHHHCCCCCCCCCHHHEE LRVTIDRDLNVVDAEASSEWVPYPGHCQSAPPTYRALIGLNLFRNFRRNANRLLAGVAGC EEEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHLTELCAVLPTAAIQAFAGDVWNVREEGGEGPDHDGAHAEPPFQLGRCRALRFDGEVVR HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCHHHCCEEEEECCHHHHH QYYPRWYGPIRPDLPGEGSTKE HHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PLSEPVPRQLRHRRAIRAEAYERGDGLWDIEACLTDHKPRDVALASGIRPQGLPIHELW CCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCHHHHCCCCCCCCCHHHEE LRVTIDRDLNVVDAEASSEWVPYPGHCQSAPPTYRALIGLNLFRNFRRNANRLLAGVAGC EEEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHLTELCAVLPTAAIQAFAGDVWNVREEGGEGPDHDGAHAEPPFQLGRCRALRFDGEVVR HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCHHHCCEEEEECCHHHHH QYYPRWYGPIRPDLPGEGSTKE HHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA