| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is recX [H]
Identifier: 116690671
GI number: 116690671
Start: 2937161
End: 2938054
Strand: Reverse
Name: recX [H]
Synonym: Bcen2424_2651
Alternate gene names: 116690671
Gene position: 2938054-2937161 (Counterclockwise)
Preceding gene: 116690672
Following gene: 116690670
Centisome position: 84.33
GC content: 69.02
Gene sequence:
>894_bases ATGGTTGTGCGCCGAGGTCAGGCTGGCGAGCCGGAGGAGAGCGACGTGCCCGAAACGGCGGGTCGCTCCGGCCGGCGAGC CGGTTCCTCGGGCGCCGACCGGCGGGGCGCAGGCGGCAACGCCGCGAACCGCACTGCGACGAGGGCATCCGACGATGCCC TCGTTTCATTTGAGATTGCCGCACCGGACGATCCGTTCGACGACGACGAGTCGTTCGACGCGCATGATCGCTCCCGCCGT CGCGTGTCCGGTGTCCGCTTCCCGGGCGATCGCGCCCCGAGCAATCGCACAGCCGATGCGCCCGCGACGGAAGATGTCTA TACGCGCAGCAGCCAGCATCCGCGCCGCACACGCCGCGCAGCCGGTGCGTCTTTCGGCGCATCTTCCAGCGGCGCTGCTT CGAGCGACGCGCCGGGCGCCAGCGAGCGCAAGTCGTCGAAGCCGCCGCGGTCGTTGAAGGGCCGCGCGCTCGGCTATCTG TCGAGGCGTGAATACAGCCGCGCGGAGCTCGCGCGCAAGCTCGCACCCTACGTCGACGAAGGCGAGTCCATCGAACCGGT GCTCGATGCGCTGGAACAGGAAGGCTGGCTGTCCGACGCGCGCTTCGCCGAGAGCCTCGTGCATCGTCGCGCGTCGCGTG TCGGCGTCGCGCGCATCGTCAGCGAGCTGAAGCGCCATGCGGTCGGCGACAGTCTCGTCGAAGAGGTGAATGCCCAATTG CGCGAGACCGAATTGACGCGCGCGCAGGCTGTCTGGCGCAAGAAATTCGGTGCACTGCCGCAAACGCCCGCCGAACGCGC GAAGCAGGCGCGCTTCCTGGCCGCGCGCGGCTTCTCGAGCGCGACCATCGTGAAGTTGCTGAAGGTCGGCGACGATTTCC CGATCGACGACTGA
Upstream 100 bases:
>100_bases TCGCACGCGAGATCGAAAACCGCATCCGCGAATCGCTCGGTGTCGTCAGCATGCCCGATGGCGTAGCCAACGAAGCCGAG GCGTTGGACGAAGAAGAGTA
Downstream 100 bases:
>100_bases GCCGCCCGGTCGCGCGCGTGGCGCGCGATTTTGCTGCATTGCAACCGCTTCCGGACAGGCGGGAATACCCGCCGTCGCGG CAAACTGTCTCAAATACCCA
Product: recombination regulator RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MVVRRGQAGEPEESDVPETAGRSGRRAGSSGADRRGAGGNAANRTATRASDDALVSFEIAAPDDPFDDDESFDAHDRSRR RVSGVRFPGDRAPSNRTADAPATEDVYTRSSQHPRRTRRAAGASFGASSSGAASSDAPGASERKSSKPPRSLKGRALGYL SRREYSRAELARKLAPYVDEGESIEPVLDALEQEGWLSDARFAESLVHRRASRVGVARIVSELKRHAVGDSLVEEVNAQL RETELTRAQAVWRKKFGALPQTPAERAKQARFLAARGFSSATIVKLLKVGDDFPIDD
Sequences:
>Translated_297_residues MVVRRGQAGEPEESDVPETAGRSGRRAGSSGADRRGAGGNAANRTATRASDDALVSFEIAAPDDPFDDDESFDAHDRSRR RVSGVRFPGDRAPSNRTADAPATEDVYTRSSQHPRRTRRAAGASFGASSSGAASSDAPGASERKSSKPPRSLKGRALGYL SRREYSRAELARKLAPYVDEGESIEPVLDALEQEGWLSDARFAESLVHRRASRVGVARIVSELKRHAVGDSLVEEVNAQL RETELTRAQAVWRKKFGALPQTPAERAKQARFLAARGFSSATIVKLLKVGDDFPIDD >Mature_297_residues MVVRRGQAGEPEESDVPETAGRSGRRAGSSGADRRGAGGNAANRTATRASDDALVSFEIAAPDDPFDDDESFDAHDRSRR RVSGVRFPGDRAPSNRTADAPATEDVYTRSSQHPRRTRRAAGASFGASSSGAASSDAPGASERKSSKPPRSLKGRALGYL SRREYSRAELARKLAPYVDEGESIEPVLDALEQEGWLSDARFAESLVHRRASRVGVARIVSELKRHAVGDSLVEEVNAQL RETELTRAQAVWRKKFGALPQTPAERAKQARFLAARGFSSATIVKLLKVGDDFPIDD
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 32072; Mature: 32072
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVRRGQAGEPEESDVPETAGRSGRRAGSSGADRRGAGGNAANRTATRASDDALVSFEIA CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC APDDPFDDDESFDAHDRSRRRVSGVRFPGDRAPSNRTADAPATEDVYTRSSQHPRRTRRA CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHH AGASFGASSSGAASSDAPGASERKSSKPPRSLKGRALGYLSRREYSRAELARKLAPYVDE HCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC GESIEPVLDALEQEGWLSDARFAESLVHRRASRVGVARIVSELKRHAVGDSLVEEVNAQL CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RETELTRAQAVWRKKFGALPQTPAERAKQARFLAARGFSSATIVKLLKVGDDFPIDD HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVVRRGQAGEPEESDVPETAGRSGRRAGSSGADRRGAGGNAANRTATRASDDALVSFEIA CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC APDDPFDDDESFDAHDRSRRRVSGVRFPGDRAPSNRTADAPATEDVYTRSSQHPRRTRRA CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHH AGASFGASSSGAASSDAPGASERKSSKPPRSLKGRALGYLSRREYSRAELARKLAPYVDE HCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC GESIEPVLDALEQEGWLSDARFAESLVHRRASRVGVARIVSELKRHAVGDSLVEEVNAQL CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RETELTRAQAVWRKKFGALPQTPAERAKQARFLAARGFSSATIVKLLKVGDDFPIDD HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]