Click here to switch to the map view.

The map label for this gene is scrK [H]

Identifier: 116690617

GI number: 116690617

Start: 2875504

End: 2876460

Strand: Reverse

Name: scrK [H]

Synonym: Bcen2424_2597

Alternate gene names: 116690617

Gene position: 2876460-2875504 (Counterclockwise)

Preceding gene: 116690618

Following gene: 116690616

Centisome position: 82.56

GC content: 72.31

Gene sequence:

>957_bases
ATGGCCGAGATCGTCGTCGCCGGCGAACTGCTGGCCGAATTCGTCGCCGCCGAGCGCGGCCAGGGTTTCGATACGCCAGG
CCTGTTCGAAGGACCGTTCCCGAGCGGCGCGCCGGCGATCTTCGCCGATCAGGCCGCGCGGCTCGGTGCGCGCGTCGCGT
ATGCGGGCTGCGTCGGCCGCGATGCGTTCGGCGATGCGATCGTCGCGCGGCTCGCCCGGGACGGCGTCGACGTCGCGCGC
ATTCGTCGCGTCGCCCGCCCGACCGGCACCGCGTTCGTCGCGTATCGCGACGACGGCTCGCGCAGTTTCGTGTTCACGTT
GTCGACCAGTGCCGCGGCGTGCGTCGATGCGTCCGACGTCGACACCGCGATGTTCGACGGCTGCCGCTACTTCCACGTGA
TGGGCTCGTCGCTGACGAGCGAATCGGCGATCGCGGCCGTGCAGCGCGGCGTGATCGAGGCTGCGCGCGCCGGCGCCAAG
GTGTCGTTCGATCCGAACGTGCGGCCTGAAATGCTGAGTTTCCGCCCGATGCGCGCGGCGCTCGACGAGATGCTCGCCGC
GTGCCACCTGTTCCTGCCGAGCGAAGCCGACCTGCCGTTCTTCTGCGGCCCGCAGCCGGCCGAGCGCGCGATCGCGGGCC
TGCTCGCGACGCATCCGCTGCTCGAGCGCGTCGTGCTCAAACGCGGCGCGCAAGGCAGCGTCGCGTTCGATCGCGCGCAC
CGTGCCGAAGCGCCGGCGTTCCCGGTCGACGAAGTCGATCCGACCGGCGCCGGCGACTGCTTCGGCGGCACGCTGGTCGC
GAGCCTCGTCGCGGGCGTGGCCGTCGACGTCGCGCTGCGCCGTGCGAACGCGGCCGGCGCGATCGCGGTCACGCGGCGCG
GCCCGATGGAAGGCAACAGCAGCGCGGCCGAGATCGACCGCTTCCTGACCGAACGGGGGATCGCATGTCCGGCCTGA

Upstream 100 bases:

>100_bases
TGGCGGCAACTGGATGAGCTGACGTGGCGCCGCTCGCACGCGCCATCCGCCGGCCGGCCCGCGACGCAGCGGCCGCCGTC
GCACGAGGAGGGCTCGCCTG

Downstream 100 bases:

>100_bases
CGACCGTTGCCGAACGCCCGCGCACCGCGCACGCGGACACCGTGCTGCGGATGATCTTCGACGCGAACCGCGCGGACGCG
CAGCGCGGCATCTATTCGGT

Product: ribokinase-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MAEIVVAGELLAEFVAAERGQGFDTPGLFEGPFPSGAPAIFADQAARLGARVAYAGCVGRDAFGDAIVARLARDGVDVAR
IRRVARPTGTAFVAYRDDGSRSFVFTLSTSAAACVDASDVDTAMFDGCRYFHVMGSSLTSESAIAAVQRGVIEAARAGAK
VSFDPNVRPEMLSFRPMRAALDEMLAACHLFLPSEADLPFFCGPQPAERAIAGLLATHPLLERVVLKRGAQGSVAFDRAH
RAEAPAFPVDEVDPTGAGDCFGGTLVASLVAGVAVDVALRRANAAGAIAVTRRGPMEGNSSAAEIDRFLTERGIACPA

Sequences:

>Translated_318_residues
MAEIVVAGELLAEFVAAERGQGFDTPGLFEGPFPSGAPAIFADQAARLGARVAYAGCVGRDAFGDAIVARLARDGVDVAR
IRRVARPTGTAFVAYRDDGSRSFVFTLSTSAAACVDASDVDTAMFDGCRYFHVMGSSLTSESAIAAVQRGVIEAARAGAK
VSFDPNVRPEMLSFRPMRAALDEMLAACHLFLPSEADLPFFCGPQPAERAIAGLLATHPLLERVVLKRGAQGSVAFDRAH
RAEAPAFPVDEVDPTGAGDCFGGTLVASLVAGVAVDVALRRANAAGAIAVTRRGPMEGNSSAAEIDRFLTERGIACPA
>Mature_317_residues
AEIVVAGELLAEFVAAERGQGFDTPGLFEGPFPSGAPAIFADQAARLGARVAYAGCVGRDAFGDAIVARLARDGVDVARI
RRVARPTGTAFVAYRDDGSRSFVFTLSTSAAACVDASDVDTAMFDGCRYFHVMGSSLTSESAIAAVQRGVIEAARAGAKV
SFDPNVRPEMLSFRPMRAALDEMLAACHLFLPSEADLPFFCGPQPAERAIAGLLATHPLLERVVLKRGAQGSVAFDRAHR
AEAPAFPVDEVDPTGAGDCFGGTLVASLVAGVAVDVALRRANAAGAIAVTRRGPMEGNSSAAEIDRFLTERGIACPA

Specific function: Ribose metabolism; first step. [C]

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI1790193, Length=316, Percent_Identity=27.2151898734177, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87082281, Length=264, Percent_Identity=28.030303030303, Blast_Score=66, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17532905, Length=328, Percent_Identity=27.7439024390244, Blast_Score=82, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.4 [H]

Molecular weight: Translated: 33077; Mature: 32946

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIVVAGELLAEFVAAERGQGFDTPGLFEGPFPSGAPAIFADQAARLGARVAYAGCVGR
CCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DAFGDAIVARLARDGVDVARIRRVARPTGTAFVAYRDDGSRSFVFTLSTSAAACVDASDV
HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCHHHCCCCCC
DTAMFDGCRYFHVMGSSLTSESAIAAVQRGVIEAARAGAKVSFDPNVRPEMLSFRPMRAA
HHHHHHCCCEEEHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCHHHHH
LDEMLAACHLFLPSEADLPFFCGPQPAERAIAGLLATHPLLERVVLKRGAQGSVAFDRAH
HHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
RAEAPAFPVDEVDPTGAGDCFGGTLVASLVAGVAVDVALRRANAAGAIAVTRRGPMEGNS
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
SAAEIDRFLTERGIACPA
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AEIVVAGELLAEFVAAERGQGFDTPGLFEGPFPSGAPAIFADQAARLGARVAYAGCVGR
CEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DAFGDAIVARLARDGVDVARIRRVARPTGTAFVAYRDDGSRSFVFTLSTSAAACVDASDV
HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCHHHCCCCCC
DTAMFDGCRYFHVMGSSLTSESAIAAVQRGVIEAARAGAKVSFDPNVRPEMLSFRPMRAA
HHHHHHCCCEEEHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCHHHHH
LDEMLAACHLFLPSEADLPFFCGPQPAERAIAGLLATHPLLERVVLKRGAQGSVAFDRAH
HHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
RAEAPAFPVDEVDPTGAGDCFGGTLVASLVAGVAVDVALRRANAAGAIAVTRRGPMEGNS
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
SAAEIDRFLTERGIACPA
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1809835 [H]