| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is ntaB [H]
Identifier: 116690595
GI number: 116690595
Start: 2850452
End: 2850961
Strand: Direct
Name: ntaB [H]
Synonym: Bcen2424_2575
Alternate gene names: 116690595
Gene position: 2850452-2850961 (Clockwise)
Preceding gene: 116690594
Following gene: 116690597
Centisome position: 81.82
GC content: 67.45
Gene sequence:
>510_bases ATGAGCCACGCCAATCCGCCGGATTTCGACGCGGCCGCCTTCCGGCAGGCACTCGGCCAGTTCGCGACGGGCGTGACGGT GATCACGACGCGCGCGCCGTCCGGCCAGCTGATCGGCATCACCGCCAGCTCGTTCAATTCGGTGTCGCTCGATCCGCCGC TCGTGCTGTGGAGCCTCGCGCACAAATCGGCGTCGACGCCGGTGTTCCGCGGCAACAGCCATTACGTGGTGAACGTGCTC GCGGCGTCGCAACTCGACCTGTGCAAGCGCTTCTCGACCTACAAGGGCGATCGTTTCGAAGGGATCGCGCACGCGGCCGG CAACTCGGGAATGCCGGTGCTCGACGGCGCGCTCGCGTGGTTCGAATGCCACAACCGCAGCCGCTACGACGAAGGCGACC ACGTGATCTTCGTCGGCGAAGTGGAACGCTGCGGCGTGCGCGCGGTATCGGAAACGGCCCCGCCGCTCGTGTTCCACGGC GGCGGCTTCCACGGCCTCACACCGCTTTGA
Upstream 100 bases:
>100_bases GCACCCCTTCCCAATCGACCGCGTTGTCATTTTTCGTCCGCCGCGCCCGTCACGCCCGTGTCGTGTCGCGCCCGCCCGTC CCGTTCCGGATGGCTGCCCG
Downstream 100 bases:
>100_bases TCGCCCCCGTGCGCGCCAGTCCGACCGGCGCGCCGGCTTCGTCCTTCAGCGTCTGCAGCACGATGTTCGACCGGATGTCC ATCACGCCCGGCGCCTTGTA
Product: flavin reductase domain-containing protein
Products: NAD(+); reduced flavin [C]
Alternate protein names: NTA monooxygenase component B; NTA-MO B [H]
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MSHANPPDFDAAAFRQALGQFATGVTVITTRAPSGQLIGITASSFNSVSLDPPLVLWSLAHKSASTPVFRGNSHYVVNVL AASQLDLCKRFSTYKGDRFEGIAHAAGNSGMPVLDGALAWFECHNRSRYDEGDHVIFVGEVERCGVRAVSETAPPLVFHG GGFHGLTPL
Sequences:
>Translated_169_residues MSHANPPDFDAAAFRQALGQFATGVTVITTRAPSGQLIGITASSFNSVSLDPPLVLWSLAHKSASTPVFRGNSHYVVNVL AASQLDLCKRFSTYKGDRFEGIAHAAGNSGMPVLDGALAWFECHNRSRYDEGDHVIFVGEVERCGVRAVSETAPPLVFHG GGFHGLTPL >Mature_168_residues SHANPPDFDAAAFRQALGQFATGVTVITTRAPSGQLIGITASSFNSVSLDPPLVLWSLAHKSASTPVFRGNSHYVVNVLA ASQLDLCKRFSTYKGDRFEGIAHAAGNSGMPVLDGALAWFECHNRSRYDEGDHVIFVGEVERCGVRAVSETAPPLVFHGG GFHGLTPL
Specific function: Hydroxylation of nitrilotriacetate [H]
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081819, Length=161, Percent_Identity=31.6770186335404, Blast_Score=66, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 - InterPro: IPR011991 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: 1.6.8.- [C]
Molecular weight: Translated: 17995; Mature: 17864
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHANPPDFDAAAFRQALGQFATGVTVITTRAPSGQLIGITASSFNSVSLDPPLVLWSLA CCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEHH HKSASTPVFRGNSHYVVNVLAASQLDLCKRFSTYKGDRFEGIAHAAGNSGMPVLDGALAW HCCCCCCEEECCCCEEEEEECHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHE FECHNRSRYDEGDHVIFVGEVERCGVRAVSETAPPLVFHGGGFHGLTPL EHHCCCCCCCCCCEEEEEECCCCCCCEEHHCCCCCEEEECCCCCCCCCC >Mature Secondary Structure SHANPPDFDAAAFRQALGQFATGVTVITTRAPSGQLIGITASSFNSVSLDPPLVLWSLA CCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEHH HKSASTPVFRGNSHYVVNVLAASQLDLCKRFSTYKGDRFEGIAHAAGNSGMPVLDGALAW HCCCCCCEEECCCCEEEEEECHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHE FECHNRSRYDEGDHVIFVGEVERCGVRAVSETAPPLVFHGGGFHGLTPL EHHCCCCCCCCCCEEEEEECCCCCCCEEHHCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; flavin [C]
Specific reaction: NADH + flavin = NAD(+) + reduced flavin [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8892809; 9023192; 1735711 [H]